Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq68985 178 2e-42 seq33735 178 2e-42 seq48657 134 2e-29 seq30282 100 5e-19 >seq68985 Length=1512 Score = 178 bits (196), Expect = 2e-42 Identities = 189/244 (77%), Gaps = 8/244 (3%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||||||||||| |||||||||||| |||||||||||||||||||||||||| || Sbjct 744 CATTGTAGCGCGCGTGCAGCCCAGAACATCGAAGGGCATCACAGACCTGTTATTGCCACA 685 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG- 135 ||||| | ||| ||||| |||||||| || | | || | ||| | Sbjct 684 --CTTCCCCCAAGTTGAACTTGGTAGTCTCTCTAAGAT--CAATCCCGAAATA-AGTGGG 630 Query 136 -ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAC 194 ||| | |||| || || ||||||| |||||| ||||||||||| |||| ||||| Sbjct 629 AATGTAATCAATTAG-AGATTGTGGTCTCGCTCGTTACCGGAATTAACCTGACAGATCAC 571 Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||||||||||||||||||||||||||||| || | |||| |||||| || ||| || Sbjct 570 TCCACCAACTAAGAACGGCCATGCACCACCAATCACCGTATCATGAAAGATCTGTCATTC 511 Query 255 TGTC 258 |||| Sbjct 510 TGTC 507 >seq33735 Length=1576 Score = 178 bits (196), Expect = 2e-42 Identities = 189/244 (77%), Gaps = 8/244 (3%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||||||||||| |||||||||||| |||||||||||||||||||||||||| || Sbjct 833 CATTGTAGCGCGCGTGCAGCCCAGAACATCGAAGGGCATCACAGACCTGTTATTGCCACA 892 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG- 135 ||||| | ||| ||||| |||||||| || | | || | ||| | Sbjct 893 --CTTCCCCCAAGTTGAACTTGGTAGTCTCTCTAAGAT--CAATCCCGAAATA-AGTGGG 947 Query 136 -ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAC 194 ||| | |||| || || ||||||| |||||| ||||||||||| |||| ||||| Sbjct 948 AATGTAATCAATTAG-AGATTGTGGTCTCGCTCGTTACCGGAATTAACCTGACAGATCAC 1006 Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||||||||||||||||||||||||||||| || | |||| |||||| || ||| || Sbjct 1007 TCCACCAACTAAGAACGGCCATGCACCACCAATCACCGTATCATGAAAGATCTGTCATTC 1066 Query 255 TGTC 258 |||| Sbjct 1067 TGTC 1070 >seq48657 Length=15905 Score = 134 bits (148), Expect = 2e-29 Identities = 179/243 (74%), Gaps = 17/243 (7%) Strand=Plus/Plus Query 20 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 79 |||||| || |||| |||||||||||| ||||| |||||||||||||||||||| || | Sbjct 14025 TGTAGCACGAGTGCAGCCCAGAACATCAAAGGGAATCACAGACCTGTTATTGCCACA--C 14082 Query 80 TTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGG 139 |||| | | ||| ||||| ||| |||| || | || || | ||| || Sbjct 14083 TTCCCCTAAGTTGAACTTGGTAGTCTCTCCAAGAT--CAATC-CCGACTA-AGT----GG 14134 Query 140 GGCTAT------TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 || | | |||| | | ||||||| |||||| || |||||||| |||| |||| Sbjct 14135 GGTTGTAATCAATTAGT-GACTGTGGTCTCGCTCGTTACCGTAATTAACCTGACAGATCA 14193 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||| ||||||||||||||||||||| || | ||| |||||| || ||| | Sbjct 14194 CTCCACCAACCAAGAACGGCCATGCACCACCAATCACAATTTCATGAAAGATCTGTCATT 14253 Query 254 CTG 256 ||| Sbjct 14254 CTG 14256 >seq30282 Length=15353 Score = 100 bits (110), Expect = 5e-19 Identities = 172/244 (70%), Gaps = 17/244 (7%) Strand=Plus/Minus Query 20 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 79 |||||||||||||| ||||||| |||| ||| | | |||||||||||||||||| || | Sbjct 1326 TGTAGCGCGCGTGCAGCCCAGAGCATCAAAGAGAACCACAGACCTGTTATTGCCACA--C 1269 Query 80 TTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGG 139 ||| | | ||| ||||| ||||| || || | | | |||| ||| Sbjct 1268 TTCTCCTAAGTTGAACTTGGTAGTCTCTCTAGGAT--CAATCCCGA--CATAAG---TGG 1216 Query 140 GGCTAT------TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 || | | |||| || | ||||||| | |||| ||||||||||| | || |||| Sbjct 1215 GGTTGTAATCAATTAG-AGACTGTGGTCTCGCTTGTTACCGGAATTAACCTGGCAGATCA 1157 Query 194 CTCCACCAACT-AAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 ||| ||||| | ||||| ||||||||||||||| || ||| ||||| || ||| Sbjct 1156 CTCTACCAATTAAAGAATGGCCATGCACCACCAATCACCATTTCATAAAAGATCTGTCAT 1097 Query 253 TCTG 256 |||| Sbjct 1096 TCTG 1093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796267041645