Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq68985 168 1e-39 seq33735 168 1e-39 seq48657 111 3e-22 >seq68985 Length=1512 Score = 168 bits (186), Expect = 1e-39 Identities = 193/256 (75%), Gaps = 10/256 (4%) Strand=Plus/Plus Query 74 TCTTAGAGGGACTATCG-GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 |||||||| ||||| | | |||| | |||||| || ||||||||||||||||||| Sbjct 650 TCTTAGAGAGACTACCAAGTTCAACTTGGGGGAAGTGTG--GCAATAACAGGTCTGTGAT 707 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||| |||||||||||| |||||||||||||| || ||| ||| |||| Sbjct 708 GCCCTTCGATGTTCTGGGCTGCACGCGCGCTACAATGGCAGCAGCAAATAGTT-----GT 762 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 ||| || ||| | ||||| |||| |||||||| | ||||| |||| ||| | Sbjct 763 TTGCTCGAAAGAGTAGACTAATC--ATTAATTGCTGTCGTGATCGGGATTGAGCCTTGTA 820 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 |||||||||| | || | ||||| ||| |||||||| ||||||| | | ||||| ||| Sbjct 821 ATTATTGCTCATGAAAGTGGAATTCCTCGTAAGCGCAAGTCATCAACTTGTGTTGAATAC 880 Query 313 GTCCCTGCCCTTTGTA 328 ||| |||||||||||| Sbjct 881 GTCTCTGCCCTTTGTA 896 >seq33735 Length=1576 Score = 168 bits (186), Expect = 1e-39 Identities = 193/256 (75%), Gaps = 10/256 (4%) Strand=Plus/Minus Query 74 TCTTAGAGGGACTATCG-GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 |||||||| ||||| | | |||| | |||||| || ||||||||||||||||||| Sbjct 927 TCTTAGAGAGACTACCAAGTTCAACTTGGGGGAAGTGTG--GCAATAACAGGTCTGTGAT 870 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||| |||||||||||| |||||||||||||| || ||| ||| |||| | Sbjct 869 GCCCTTCGATGTTCTGGGCTGCACGCGCGCTACAATGGCAGCAGCAAATAGTTGTT---- 814 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 || || ||| | ||||| | ||| |||||||| | ||||| |||| ||| | Sbjct 813 -TGCTCGAAAGAGTAGACTAATCAT--TAATTGCTGTCGTGATCGGGATTGAGCCTTGTA 757 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 |||||||||| | || | ||||| ||| |||||||| ||||||| | | ||||| ||| Sbjct 756 ATTATTGCTCATGAAAGTGGAATTCCTCGTAAGCGCAAGTCATCAACTTGTGTTGAATAC 697 Query 313 GTCCCTGCCCTTTGTA 328 ||| |||||||||||| Sbjct 696 GTCTCTGCCCTTTGTA 681 >seq48657 Length=15905 Score = 111 bits (122), Expect = 3e-22 Identities = 145/196 (74%), Gaps = 11/196 (6%) Strand=Plus/Minus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 |||||| || ||||||||||||||||||| ||||| |||||||||||| |||| || || Sbjct 14086 GGAAGTGTG--GCAATAACAGGTCTGTGATTCCCTTTGATGTTCTGGGCTGCACTCGTGC 14029 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGA-AGGTCTGGGTAATCTTGTTA 221 |||| | ||| ||| |||| | || | | ||| | | | ||||| ||| Sbjct 14028 TACAATTGCAGCAGCAAATAGTTGTTTAC--TCGAAGGAGAAGAC----TAATC--ATTA 13977 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 | ||||| ||| | ||||| |||| ||| ||||||| ||| | || | ||||| ||| | Sbjct 13976 ATTTCTGTTGTGATTGGGATTGAGCCTTGTAATTATTACTCATGAAAGTGGAATTCCTCG 13917 Query 282 TAAGCGCGTGTCATCA 297 || ||||| ||||||| Sbjct 13916 TAGGCGCGAGTCATCA 13901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946546005760