Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq6021 452 1e-124 >seq6021 Length=2520 Score = 452 bits (500), Expect = 1e-124 Identities = 425/536 (79%), Gaps = 9/536 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| | | ||||||| | | ||||| |||| ||||| | |||| Sbjct 1933 CTTTTGCTCTACTTGTGGTTTCTGTCCACAATGAGCTTGCCTTTGGACATCCTCGTTGCA 1874 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA-T 125 ||| | ||||| ||||||||| ||||||||||| |||| ||||||| | || | Sbjct 1873 ATTTTAAGGATGTACCGCCCCAGTCAAACTCCCCATCTGATTATGTCATTGGACGAGAGT 1814 Query 126 CGGCCC-GCGAAGGACCTTAACGCCAGAAA--ATGGTCGGTGAAGAC--CAGTTCCGCTT 180 | | || || |||| | | || | | || || | || | | || Sbjct 1813 CAACAGTGCTAACTGTCTTATATCTACGAATCAACTTACGTTAATAAGTCATTCTCTTTT 1754 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---CCGAAACGGC 237 | ||| ||| |||||||| | |||||||||||||| | || ||||||| | Sbjct 1753 AACCAATTTAGTGTGAAAACGATGAAAGTAGTGGTATTTCATTGTCGATGCCGAAACATC 1694 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||||||||||||||| |||| ||| | ||||||| || |||||||||||||||||| Sbjct 1693 TCCCACTTATTCTACACCCCTCATGTCTTCTCACAAAATCAAACTAGAGTCAAGCTCAAC 1634 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | | | |||||||||||||||| |||||| |||||| || Sbjct 1633 AGGGTCTTCTTTCCCCGCTAACCCAGTCAAGCCCGTTCCCTTGACTGTGGGTTCGCTGGA 1574 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 | |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1573 TGGTAGGTAGGGACAGTGGGAATCTCGTTGCTCCATTCATGCGCGTCACTAATTAGATGA 1514 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||| Sbjct 1513 CGAGGCATTTGGCTACCTTTAGAAAGTCATAGTTACTTCCGCCGTTTACCCGTGCTTGGT 1454 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1453 TGCATTTCTGCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 1398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634070976160