Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq605934 158 5e-36 seq36254 91.5 6e-16 seq424217 86.0 3e-14 >seq605934 Length=36846 Score = 158 bits (174), Expect = 5e-36 Identities = 104/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct 26672 GGACCCGAAAGATGGTGAACTATGCCCGAGCAGGATGAAGCCAGAGGAAACTCTGGTGGA 26731 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||| ||||| ||||||||||||||||| | |||||||||||||||| Sbjct 26732 GGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCCGACTTGGGTATAGGGGCGA 26786 >seq36254 Length=78239 Score = 91.5 bits (100), Expect = 6e-16 Identities = 89/107 (83%), Gaps = 7/107 (7%) Strand=Plus/Plus Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGG--TGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||| ||||||| || || || | |||||||||||||||||||||||||| Sbjct 11044 CCCGAAAGATGG-GAACTATCCCCGAGCAGAGACTGAAGCCAGAGGAAACTCTGGTGGAG 11102 Query 630 G-CTCGCA-GCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 | |||| ||| |||| | |||||||||||||||| | ||||||| Sbjct 11103 GTAACGCAGGCGATTCT-GAGTGCAAATCGATCGTC-GACTTGGGTA 11147 >seq424217 Length=14372 Score = 86.0 bits (94), Expect = 3e-14 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||| ||||||| ||||| ||||||||||||||||| | ||||||||||| Sbjct 754 CTCTGGTGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCCGACTTGGGTATAGG 813 Query 679 GGCGA 683 ||||| Sbjct 814 GGCGA 818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2066334827050