Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq605934 105 3e-21 seq113065 104 1e-20 seq36254 80.6 1e-13 >seq605934 Length=36846 Score = 105 bits (116), Expect = 3e-21 Identities = 86/102 (84%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| || Sbjct 4709 GGAAAAGAAACTAACGAGGATTCCCTCAGTAGCGGCGAGTGAAGCGGGAAGAGCCCATCG 4650 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGC-GGGACATGTGGCGT 101 | ||||||||| || || |||| | |||| |||||||| Sbjct 4649 CTGAATCCCCGGACC-CGACCGGGCTCGGGGAGTTGTGGCGT 4609 Score = 105 bits (116), Expect = 3e-21 Identities = 86/102 (84%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| || Sbjct 25663 GGAAAAGAAACTAACGAGGATTCCCTCAGTAGCGGCGAGTGAAGCGGGAAGAGCCCATCG 25722 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGC-GGGACATGTGGCGT 101 | ||||||||| || || |||| | |||| |||||||| Sbjct 25723 CTGAATCCCCGGACC-CGACCGGGCTCGGGGAGTTGTGGCGT 25763 >seq113065 Length=6675 Score = 104 bits (114), Expect = 1e-20 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| ||| Sbjct 1067 AAAAGAAACTAACGAGGATTCCCTCAGTAGCGGCGAGTGAAGCGGGAAGAGCCCATCGCT 1008 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101 ||||||| | || || |||| ||||| |||||||| Sbjct 1007 GAATCCCGGACC--CGACCGGGCTCGGGAGTTGTGGCGT 971 >seq36254 Length=78239 Score = 80.6 bits (88), Expect = 1e-13 Identities = 55/61 (90%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||| || Sbjct 9904 GGAAAAGAAACTAACGAGGATTCC-TCAGTAGCGGCGAGTGAAGCGGGAAGAGCCCATCG 9962 Query 61 C 61 | Sbjct 9963 C 9963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229023926640