Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq424217 567 2e-159 seq605934 533 5e-149 seq295869 141 3e-31 seq26045 113 1e-22 seq380862 107 6e-21 seq214339 107 6e-21 seq343877 98.7 3e-18 seq36254 98.7 3e-18 seq568622 84.2 7e-14 >seq424217 Length=14372 Score = 567 bits (628), Expect = 2e-159 Identities = 460/556 (83%), Gaps = 32/556 (6%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| | ||||||||||||||||||| Sbjct 2791 CTTTTGCTCTACGCGAGGTTTCCGTCCTCGCTGAGCTCGCCTTAGGACACCTGCGTTACC 2732 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||| |||| || ||| || Sbjct 2731 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCTGTCTTCGGAGCGGGTC 2672 Query 127 G--GCCCGCGAAGGACC----------TTAACGCCAGAAAATGGTCG----------GTG 164 | ||||| | |||| ||| | ||||||| || || | | Sbjct 2671 GCGGCCCGGGTGCGACCCCGGGGCCGCTTAGCACCAGAAATCGGACGCCACCGCCATGGG 2612 Query 165 AAGACCAGTT--CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC 222 || || ||| ||| || |||||||| ||||||| || ||||||||||||||| Sbjct 2611 CGCGCCCGTCTCCCGACTCACCGAATAAGTAAAGAAACGATGAGAGTAGTGGTATTTCAC 2552 Query 223 TTGCG----CCGAAACGGC---TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAG 275 | ||| || | ||| |||||| ||| ||||||| |||| ||| ||||||| | Sbjct 2551 TGGCGATAACCACGAGGGCACCTCCCACCTATCCTACACCCCTCATGTCTCTTCACAAGG 2492 Query 276 TCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTC 335 || |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 2491 TCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC-GCTGATTCTGCCAAGCCCGTTC 2433 Query 336 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2432 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 2373 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2372 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 2313 Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2312 CCGCCGTTTACCCGCGCTTCGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 2253 Query 516 AATCACATTGCGTCAA 531 |||||||||||||||| Sbjct 2252 AATCACATTGCGTCAA 2237 Score = 396 bits (438), Expect = 9e-108 Identities = 360/454 (79%), Gaps = 31/454 (7%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| | ||||||||||||||||||| Sbjct 9715 CTTTTGCTCTACGCGAGGTTTCCGTCCTCGCTGAGCTCGCCTTAGGACACCTGCGTTACC 9656 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||||| |||| || ||| || Sbjct 9655 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCTGTCTTCGGAGCGGGTC 9596 Query 127 G--GCCCGCGAAGGACC----------TTAACGCCAGAAAATGGTCG----------GTG 164 | ||||| | |||| ||| | ||||||| || || | | Sbjct 9595 GCGGCCCGGGTGCGACCCCGGGGCCGCTTAGCACCAGAAATCGGACGCCACCGCCATGGG 9536 Query 165 AAGACCAGTT--CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC 222 || || ||| ||| || |||||||| ||||||| || ||||||||||||||| Sbjct 9535 CGCGCCCGTCTCCCGACTCACCGAATAAGTAAAGAAACGATGAGAGTAGTGGTATTTCAC 9476 Query 223 TTGCG----CCGAAACGGC---TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAG 275 | ||| || | ||| |||||| ||| ||||||| |||| ||| ||||||| | Sbjct 9475 TGGCGATAACCACGAGGGCACCTCCCACCTATCCTACACCCCTCATGTCTCTTCACAAGG 9416 Query 276 TCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTC 335 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 9415 TCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTC 9356 Query 336 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9355 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 9296 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429 |||||||||||||||||||||||||||||||||| Sbjct 9295 ATGCGCGTCACTAATTAGATGACGAGGCATTTGG 9262 >seq605934 Length=36846 Score = 533 bits (590), Expect = 5e-149 Identities = 454/555 (82%), Gaps = 36/555 (6%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| | ||||||||||||||||||| Sbjct 28746 CTTTTGCTCTACGCGAGGTTTCCGTCCTCGCTGAGCTCGCCTTAGGACACCTGCGTTACC 28687 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| ||||||||| |||||| |||| || ||| || Sbjct 28686 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCGCCCTGACGCTGTCTTCGGAGCGGGTC 28627 Query 127 G--GCCCGCGAAGGACC----------TTAACGCCAGAAAATGGTCGG--------TGAA 166 | ||||| | |||| ||| | ||||||| | || || Sbjct 28626 GCGGCCCGGGTGCGACCCCGGGCCCGCTTAGCACCAGAAATCGAACGCCACCGCCATGGC 28567 Query 167 GA-CCAGTT--CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACT 223 | || || ||| ||| || |||||||| ||||||| || |||||||||||||||| Sbjct 28566 GCGCCCGTCTCCCGACTCACCGAATAAGTAAAGAAACGATGAGAGTAGTGGTATTTCACT 28507 Query 224 TGCG----CCGAAACGGC---TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276 ||| || | ||| |||||| ||| ||||||| |||| ||| ||||||| || Sbjct 28506 GGCGATAACCACGAGGGCACCTCCCACCTATCCTACACCCCTCATGTCTCTTCACAAGGT 28447 Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336 | |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct 28446 CAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC---TGATTCTGCCAA--CCGTTCC 28392 Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28391 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 28332 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 28331 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT-C 28273 Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 28272 CGCCGTTTACCCGCGCTTCGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 28213 Query 517 ATCACATTGCGTCAA 531 ||||||||||||||| Sbjct 28212 ATCACATTGCGTCAA 28198 Score = 98.7 bits (108), Expect = 3e-18 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||| | ||||||||| ||| |||||||||||||||||||| |||| ||||||||||| Sbjct 12574 TAGGGTCTGTGGGAATCCCGTCCATCCATTCATGCGCGTCACTTATTACATGACGAGGCA 12633 Query 425 TTTGGCTACCTTAA 438 |||||||||| ||| Sbjct 12634 TTTGGCTACCCTAA 12647 >seq295869 Length=162356 Score = 141 bits (156), Expect = 3e-31 Identities = 89/95 (94%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||||| ||||||| || ||| |||| |||||||||||| Sbjct 110580 AAGAGAGTCATAGTTACTCCCGCCGTGTACCCGC--TTCGTTCAATTACTTCACTTTGAC 110637 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||||||||||||||||||||||||||||||||||| Sbjct 110638 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 110672 Score = 138 bits (152), Expect = 4e-30 Identities = 89/95 (94%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||||| ||||||| ||| |||||| ||| |||||||||| Sbjct 99398 AAGAGAGTCATAGTTACTCCCGCCGTGTACCCGC-CTTCGTTGAAATTCATCACTTTGAC 99456 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||||||||||| |||||||||||||||||||||| Sbjct 99457 ATTCAGAGCACT-GGCAGAAATCACATTGCGTCAA 99490 Score = 138 bits (152), Expect = 4e-30 Identities = 89/95 (94%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||||| ||||||| ||| |||||| ||| |||||||||| Sbjct 105660 AAGAGAGTCATAGTTACTCCCGCCGTGTACCCGC-CTTCGTTGAAATTCATCACTTTGAC 105718 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||||||||||| |||||||||||||||||||||| Sbjct 105719 ATTCAGAGCACT-GGCAGAAATCACATTGCGTCAA 105752 >seq26045 Length=19753 Score = 113 bits (124), Expect = 1e-22 Identities = 83/97 (86%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||| |||| ||| ||||||| | || ||||| ||||||| || ||||||||||||||| Sbjct 9701 TTACGAGAATCACAGTTACTTCTGCTGTTTATTCGCGCTTTGTCAAATTTCTTCACTTTG 9760 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||||||||| || |||||||| ||||||||||||||| Sbjct 9761 ACATTCAGATCAATGGGCAGATATCACATTGCGTCAA 9797 >seq380862 Length=27576 Score = 107 bits (118), Expect = 6e-21 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||| | ||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 13355 TAGGGTCTGTGGGAATCCCGTTAATCCATTCATGCGCGTCACTAATTACATGACGAGGCA 13296 Query 425 TTTGGCTACCTTAA 438 ||||||| || ||| Sbjct 13295 TTTGGCTTCCCTAA 13282 >seq214339 Length=63304 Score = 107 bits (118), Expect = 6e-21 Identities = 82/97 (85%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||| |||| ||| ||||||| | || ||||| | ||||| || ||||||||||||||| Sbjct 34988 TTACGAGAATCACAGTTACTTCTGCTGTTTATTCACGCTTTGTCAAATTTCTTCACTTTG 35047 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||||||||| || |||||||| ||||||||||||||| Sbjct 35048 ACATTCAGATCAATGGGCAGATATCACATTGCGTCAA 35084 >seq343877 Length=46320 Score = 98.7 bits (108), Expect = 3e-18 Identities = 82/97 (85%), Gaps = 9/97 (9%) Strand=Plus/Plus Query 302 TCTTCTTTCCC--CGCTGATTC-----CGCCAAGC-CCGTTCCCTTGGCTGTGGTTTCGC 353 || |||||||| ||||||||| || || | ||||||| |||||||||||||||| Sbjct 46220 TCGTCTTTCCCGCCGCTGATTCTCTGGCGAAAAACACCGTTCCGTTGGCTGTGGTTTCGC 46279 Query 354 TAGATAGTAGATAGGGACAGT-GGGAATCTCGTTAAT 389 ||||||||||||||||| ||| ||||||||||||||| Sbjct 46280 TAGATAGTAGATAGGGAGAGTCGGGAATCTCGTTAAT 46316 >seq36254 Length=78239 Score = 98.7 bits (108), Expect = 3e-18 Identities = 108/131 (82%), Gaps = 16/131 (12%) Strand=Plus/Minus Query 417 ACGAGG--CAT-TTGGCTACC---TTAAGAGAGT-CAT--AGTTACTCC-CGCC-GTTT- 464 |||||| ||| ||||||| | ||| || ||| ||| || |||| | |||| |||| Sbjct 13033 ACGAGGGTCATATTGGCTATCACTTTACGAAAGTGCATTCAGCTACTGCACGCCAGTTTC 12974 Query 465 ACCC--GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC- 521 |||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 12973 ACCCCAGCGCTTCGTTGAATTTCTTCACTTTGACATTCAGAGCACTTGGCAGAAATCACG 12914 Query 522 ATT-GCGTCAA 531 ||| ||||||| Sbjct 12913 ATTCGCGTCAA 12903 >seq568622 Length=22772 Score = 84.2 bits (92), Expect = 7e-14 Identities = 77/98 (79%), Gaps = 7/98 (7%) Strand=Plus/Minus Query 341 GCTGTGGTTTCGCTAGATAGTAGATAG-------GGACAGTGGGAATCTCGTTAATCCAT 393 ||| ||||||| |||| |||||||||| ||||||||||| ||| ||| |||| | Sbjct 12610 GCTTTGGTTTCACTAGGTAGTAGATAGCAGATCGGGACAGTGGGATTCTTGTTTATCCTT 12551 Query 394 TCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 ||||| || | | |||||| ||||| || ||||||||| Sbjct 12550 TCATGTGCATAATTAATTAAATGACAAGACATTTGGCT 12513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1624782615008