Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq381947 187 5e-45 seq635311 174 3e-41 seq533274 163 6e-38 seq343668 143 6e-32 seq575246 113 1e-22 seq313875 93.3 9e-17 >seq381947 Length=420 Score = 187 bits (206), Expect = 5e-45 Identities = 200/263 (76%), Gaps = 1/263 (0%) Strand=Plus/Minus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTG 126 |||| ||||| | | ||| ||||||||||| || ||||||| ||| |||||| | | Sbjct 384 TTTTCGTCCCTGAAGACAGAGGTTTACAATCC-TAAAACCTTCTTCCCTCACGCGGCATC 326 Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 |||| ||||| | || ||||||| ||||||||| |||||||||||||||||||||| | Sbjct 325 GCTGCATCAGAGTTTCCTCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 266 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246 || |||||||||||| ||||||||| || | |||||||| | ||| ||||| | Sbjct 265 GGGCCGTGTCTCAGTCCCAATGTGGCCGATCAACCTCTCAGTCCGGCTACTGATCGTCGC 206 Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATG 306 || ||| ||||||||| || |||| ||||| |||| | |||| | || |||| Sbjct 205 CTTGGTAAGCCGTTACCTTACCAACTAGCTAATCAGACGCGAGCTCATCTTTCAGCGATA 146 Query 307 AATCTTTAATGATGATACCATGC 329 ||||||| || || | ||||||| Sbjct 145 AATCTTTGATAATCAAACCATGC 123 >seq635311 Length=476 Score = 174 bits (192), Expect = 3e-41 Identities = 173/223 (78%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 || ||| |||||||||||| | |||| || ||| |||||| | | |||| |||| || Sbjct 46 AACAGAGGTTTACAATCCGAA-AACCGTCTTCCCTCACGCGGCGTTGCTGCATCAGGCTT 104 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 105 TCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 164 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||||||||| | | |||||||| | ||| | ||||| | || |||| |||||| Sbjct 165 TCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGACTTGGTGAGCCGTT 224 Query 261 ACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCG 303 ||| | || |||| ||||| | |||| |||||| | || || Sbjct 225 ACCTCACCAACTATCTAATCGGACGCGAGCCCATCTTTCAGCG 267 >seq533274 Length=508 Score = 163 bits (180), Expect = 6e-38 Identities = 120/140 (86%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| Sbjct 369 GGCTGCTGGCACGGAGTTAGCCGATCCTTATTCATACGGTACATACAAAAAGGCACACGT 428 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | ||||||||| |||||||||||||||||| || ||| | ||||||||||||| Sbjct 429 GCCTCACTTTATTCCCGTATAAAAGAAGTTTACAACCCATAGGGCAGTCATCCTTCACGC 488 Query 121 TACTTGGCTGGTTCAGACTC 140 |||||||||||||||||||| Sbjct 489 TACTTGGCTGGTTCAGACTC 508 >seq343668 Length=448 Score = 143 bits (158), Expect = 6e-32 Identities = 159/211 (75%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 69 TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGC 128 || |||| ||| | ||||||||||| || | || ||| |||||||||| | | || Sbjct 59 TTCTTCCTCTATGACAGAAGTTTACATAACGAATTAC-TTCTTCCTTCACGCGGCGTTGC 117 Query 129 TGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGG 188 | | |||| | || |||||| | || ||||| ||||||||||||||||||||| ||| Sbjct 118 TCGGTCAGGGTTTCCCCCATTGCCGAAAATTCCCTACTGCTGCCTCCCGTAGGAGTCTGG 177 Query 189 ACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCT 248 |||||||||||| ||| ||||| | | |||||||||| | ||| | ||||| | || Sbjct 178 GCCGTGTCTCAGTCCCAGTGTGGCCGGTCGTCCTCTCAGACCAGCTACCGATCGTCGCCT 237 Query 249 AGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 |||| ||| ||||| | || |||| ||||| Sbjct 238 TGGTGAGCCTTTACCTCACCAACTAGCTAAT 268 >seq575246 Length=532 Score = 113 bits (124), Expect = 1e-22 Identities = 108/136 (79%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||| ||||||| | ||||||| || ||||| | ||| | ||||||| Sbjct 135 GGCTGCTGGCACGGA-TTAGCCGGTCCTTATTCGTATGGTACCTGCAAACAATCACACGT 77 Query 61 GGAAGGTTTTATTCCCTTAT-AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119 | | ||||| ||| || ||||| ||||||||| || ||| || || |||| |||| Sbjct 76 GATTGACTTTATCCCCATACCAAAAGCAGTTTACAACCCATAGGGCCGTCGTCCTGCACG 17 Query 120 CTACTTGGCTGGTTCA 135 |||||||||||||||| Sbjct 16 CTACTTGGCTGGTTCA 1 >seq313875 Length=518 Score = 93.3 bits (102), Expect = 9e-17 Identities = 111/148 (75%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||||||| ||| | ||||| || | ||| | | Sbjct 147 GGCTGCTGGCACGGAGTTAGCCGATGCTT-TTCTTCGGGTACTCTCATCCGGTCACGCAT 89 Query 61 GGAAGGTTTTATTCCCTTATAAAA-GAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119 | | ||| |||| | |||| || |||||||| |||||| || || ||| ||||| Sbjct 88 GACCGCCTTTGCTCCCCGACAAAAAGAGGTTTACAACCCGTAGGGCCGTCTTCCCTCACG 29 Query 120 CTACTTGGCTGGTTCAGACTCTCGTCCA 147 | ||||||||||||||| || || ||| Sbjct 28 CGACTTGGCTGGTTCAGCCTTCCGGCCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1061990985152