Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq605934 82.4 1e-13 seq424217 82.4 1e-13 >seq605934 Length=36846 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || ||||| ||| || || | |||| Sbjct 29071 GTACGAGAGGAACCGCAGA-TTCGGACCG-TTGGTACACGCGCTTGGTCGAGAGGCCAGT 29128 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | ||||||||||||||| | |||||| ||||||||||||||||||| |||||| Sbjct 29129 GGCGCGAAGCTACCATCCGTGGGATTACGGCTGAACGCCTCTAAGTCGGAATCC 29182 >seq424217 Length=14372 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || ||||| ||| || || | |||| Sbjct 10041 GTACGAGAGGAACCGCAGA-TTCGGACCG-TTGGTACACGCGCTTGGTCGAGAGGCCAGT 10098 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | ||||||||||||||| | |||||| ||||||||||||||||||| |||||| Sbjct 10099 GGCGCGAAGCTACCATCCGTGGGATTACGGCTGAACGCCTCTAAGTCGGAATCC 10152 Score = 78.8 bits (86), Expect = 2e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| ||||||||||||||| | |||||| ||||||||||||||||||| ||||| Sbjct 3163 AGCCAGTGGCGCGAAGCTACCATCCGTGGGATTACGGCTGAACGCCTCTAAGTCGGAATC 3222 Query 114 C 114 | Sbjct 3223 C 3223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 814144204544