Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eucidaris_20tribuloides_20[genbank_20GCA_5F001188425.1_202015-04-14] 637,071 sequences; 2,187,261,492 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq605934 459 8e-127 seq113065 443 6e-122 seq424217 358 2e-96 seq380862 295 2e-77 seq161471 170 6e-40 seq36254 152 2e-34 seq95629 84.2 7e-14 seq408313 75.2 3e-11 seq69709 75.2 3e-11 >seq605934 Length=36846 Score = 459 bits (508), Expect = 8e-127 Identities = 422/525 (80%), Gaps = 24/525 (5%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 18094 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 18153 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18154 TCCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 18213 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| Sbjct 18214 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTGACCACCATGGT 18273 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || | |||||||||||||||||||| ||| ||| ||| || || ||||||| Sbjct 18274 AGGCGCATAACGTACCATCGAAAGTTGATAGGCGAGACATTCGAAGGATCCGTCGCCGGT 18333 Query 240 TCAAGG-CCATGCGATTCGTTAAGTTATTATGA-ATCACCA--------AGGA---GCC- 285 | ||| || |||||| | | ||||| || |||||| ||| ||| Sbjct 18334 GCCAGGACCGTGCGATCGGCTGTGTTATCCAGAGTTCACCAGTCTTTGCCGGACACGCCG 18393 Query 286 ----CCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTT 341 ||| | | |||| || | ||||||||| ||| ||||| |||||| | || Sbjct 18394 TGAGACGAGCCGGGCTGGTCTTGT-TCTAATAAAAGCACGCCTTCGTGAGTCGGCGCTTG 18452 Query 342 TA-GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATA 400 | |||||||||||||||||||||||||| ||||||||||| | || | ||| ||| Sbjct 18453 GACGCATGTATTAGCTCTAGAATTACCACAGTTATCCATGTCGGGAGACTCGATCCAATG 18512 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT-GTATAGATTGCTTATACTTAG 459 ||| ||||||||||||||||||||| ||||||||| || | || |||| ||||||| Sbjct 18513 AACCATAACTGATTTAATGAGCCATCCGCAGTTTCGCTCGGGACGA--GCTTGTACTTAG 18570 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || |||||||||||||||||||||||||||||||||||||||||| Sbjct 18571 ACGTGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 18615 Score = 453 bits (502), Expect = 3e-125 Identities = 423/526 (80%), Gaps = 26/526 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 23260 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 23201 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23200 TCCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 23141 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||| Sbjct 23140 TTCT-AGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTGACCACCATGGT 23082 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || | ||||||||||||||||||||||||| ||| ||| || || ||||||| Sbjct 23081 AGGCGCATA-CGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGATCCGTCGCCGGT 23023 Query 240 TCAAGG-CCATGCGATTCGTTAAGTTATTATGA-ATCACCA--------AGGA---GCC- 285 | ||| || |||||| | | ||||| || |||||| ||| ||| Sbjct 23022 GCCAGGACCGTGCGATCGGCTGTGTTATCCAGAGTTCACCAGTCTTTGCCGGACACGCCG 22963 Query 286 ----CCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTC-CGAAGTCGGGGTTT 340 ||| | | |||| || | |||||||| ||| ||||| | |||||| | || Sbjct 22962 TGAGACGAGCCGGGCTGGTCTTGTTCCTAATAAAAGCACGCCTTCGTGGAGTCGGCGCTT 22903 Query 341 TTA-GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAAT 399 | |||||||||||||||||||||||||| ||||||||||| | || | ||| ||| Sbjct 22902 GGACGCATGTATTAGCTCTAGAATTACCACAGTTATCCATGTCGGGAGACTCGATCCAAT 22843 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT-GTATAGATTGCTTATACTTA 458 ||| ||||||||||||||||||||| ||||||||| || | || |||| |||||| Sbjct 22842 GAACCATAACTGATTTAATGAGCCATCCGCAGTTTCGCTCGGGACGA--GCTTGTACTTA 22785 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 22784 GACGTGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 22739 Score = 316 bits (350), Expect = 6e-84 Identities = 392/525 (75%), Gaps = 31/525 (6%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCT----GTATCAGTATTTATTGTCAC 55 ||||||||||||||| || | || | |||||| ||| |||| ||||| | ||||| Sbjct 10621 GTACTCATTCCAATTGCAGGGCCTCGAAAGAGTCCTTCCTGTATTGTTATTTTTCGTCAC 10680 Query 56 TACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 10681 TACCTCCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTCGGATGTGGTAG 10740 Query 116 CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT-ACC 174 |||||||||||||||||||||||||||||||| | |||| |||||||||| |||| ||| Sbjct 10741 CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACTTTGATTCTCCGTTACCCG-TGATCACC 10799 Query 175 ATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCG 234 ||||||| | || | ||||||||||||||||||||||||| ||| || || || ||| Sbjct 10800 ATGGTAGCCGCATAACGTACCATCGAAAGTTGATAGGGCAGACATTCGAGGGATCCGTCG 10859 Query 235 CCGG-CTCAAGGCCATGCGATTCGTTAAGTTATTATGAA-TCACC-----------AAGG 281 |||| |||| || |||||| | | ||||| ||| ||||| || Sbjct 10860 CCGGTGCCAAGACCGTGCGATCGGCTGTGTTATCCAGAATTCACCAGTCTTTGCCGAACA 10919 Query 282 AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTC-CGAAGTC-GGGGTT 339 ||| || | | || | | | ||| ||| ||||| | |||| | || Sbjct 10920 CGCCGTGAGACGAGCCGGGCTGGTGT-TAA-----GCACGCCTTCGTGGAGTCAGTACTT 10973 Query 340 TTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAAT 399 ||||||||||||||||||||||| | ||| | ||||| | || | || ||| Sbjct 10974 GGGTGCATGTATTAGCTCTAGAATTACTAAAGTTTTACATGTCGGGAGTCTCGATTTAAT 11033 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459 ||| |||||||||| | |||||| | ||| ||||| | | || | || |||| | Sbjct 11034 GAACTATAACTGATTAAGTGAGCCTTCCGCGGTTTCGTTCGA-CGA--GTTTGAACTTCG 11090 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||||| |||||||| ||| ||| ||||||||||||||| Sbjct 11091 ACGTGCATGGCTAAATCTTTGCGACGAGCTTATGACTACTGGCAG 11135 Score = 306 bits (338), Expect = 1e-80 Identities = 223/256 (87%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 7130 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 7189 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7190 TCCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 7249 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| Sbjct 7250 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTGACCACCATGGT 7309 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||||||||||||||||| ||| ||| || || ||||||| Sbjct 7310 AGGCGCATAATGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGATCCGTCGCCGGT 7369 Query 240 TCAAGG-CCATGCGAT 254 | ||| || |||||| Sbjct 7370 GCCAGGACCGTGCGAT 7385 Score = 279 bits (308), Expect = 2e-72 Identities = 302/393 (77%), Gaps = 23/393 (6%) Strand=Plus/Plus Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 |||||||||||||||||| |||| ||||||||||| |||||||||||| || | | Sbjct 7832 TCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTGACCACCATGGTAGGCGCATAACGT 7891 Query 193 ACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGG-CCATGC 251 |||||||||||||||||||||||| ||| ||| || || ||||||| | ||| || ||| Sbjct 7892 ACCATCGAAAGTTGATAGGGCAGACATTCGAAGGATCCGTCGCCGGTGCCAGGACCGTGC 7951 Query 252 GATTCGTTAAGTTATTATGAAT-CACCAA--------GGAGCCCC-----GAAGGGC--- 294 ||| | | ||||| || | ||||| ||| | | || | || Sbjct 7952 GATCGGCTGTGTTATCCAGAGTTCACCAGTCTTTGCCGGACACGCCGTGAGACGAGCCGG 8011 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTA-GCATGTATT 352 | |||| || | |||||||| ||| ||||| | |||||| | || | ||||||||| Sbjct 8012 GCTGGTCTTGTTCCTAATAAAAGCACGCCTTCGTGGAGTCGGCGCTTGGACGCATGTATT 8071 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 ||||||||||||||||| ||||||||||| | || | ||| ||| ||| |||||||| Sbjct 8072 AGCTCTAGAATTACCACAGTTATCCATGTCGGGAGACTCGATCCAATGAACCATAACTGA 8131 Query 413 TTTAATGAGCCATTCGCAGTTTCACT-GTATAGATTGCTTATACTTAGACATGCATGGCT 471 ||||||||||||| ||||||||| || | || |||| ||||||||| ||||||||| Sbjct 8132 TTTAATGAGCCATCCGCAGTTTCGCTCGGGACGA--GCTTGTACTTAGACGTGCATGGCT 8189 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 8190 TAATCTTTGAGACAAGCATATGACTACTGGCAG 8222 >seq113065 Length=6675 Score = 443 bits (490), Expect = 6e-122 Identities = 419/523 (80%), Gaps = 25/523 (5%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||| | | | |||||| ||||||| ||||| | |||||||||| Sbjct 3488 GTACTCATTCCAATTACAGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCT 3547 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3548 CCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3607 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||| ||| |||| |||||| |||| ||||||||| Sbjct 3608 TCTCAGGCTCCCTCTCCGGAATCGAA-CCTGATTCTCCGTTA-CCGTGACCACCATGGTA 3665 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || | |||||||||||||||||| |||||| ||| ||| || || ||||||| Sbjct 3666 GGCGCATAACGTACCATCGAAAGTTGATA-GGCAGACATTCGAAGGATCCGTCGCCGGTG 3724 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGA-ATCACCA--------AGGA---GCCCCG 288 | ||| | |||||| | | ||||| || |||||| ||| ||| | Sbjct 3725 CCAGGACGTGCGATCGGCTGTGTTATCCAGAGTTCACCAGTCTTTGCCGGACACGCCGTG 3784 Query 289 A----AGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTC-CGAAGTCGGGGTTTTTA 343 | || | | |||| || | |||||||| ||| ||||| | |||||| | || | Sbjct 3785 AGACGAGCGGGCTGGTCTTGTTCCTAATAAAAGCACGCCTTCGTGGAGTCGGCGCTTGGA 3844 Query 344 -GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAA 402 |||||||||||||||||||||||||| ||||||||||| | || | ||| ||| || Sbjct 3845 CGCATGTATTAGCTCTAGAATTACCACAGTTATCCATGTCGGGAGACTCGATCCAATGAA 3904 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACT-GTATAGATTGCTTATACTTAGAC 461 | ||||||||||||||||||||| ||||||||| || | || |||| ||||||||| Sbjct 3905 CCATAACTGATTTAATGAGCCATCCGCAGTTTCGCTCGGGACGA--GCTTGTACTTAGAC 3962 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| |||||||||||||||||||||||||||||||||||| Sbjct 3963 GTGCAT-GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 4004 >seq424217 Length=14372 Score = 358 bits (396), Expect = 2e-96 Identities = 403/522 (77%), Gaps = 33/522 (6%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 12169 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 12228 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGC-CTGCTGCCTTCCTTGGATGTGGTAGCCG 118 |||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| Sbjct 12229 TCCCCGTGTCGGAGT--GGTAATTTGCGCGCACTGCTGCCTTCCTTGGATGTGGTAGCCG 12286 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| Sbjct 12287 TTTCTCAGGCTCCCTCTCCGGAATCGAA-CCTGATTCTCCGTTACCCGTGACCACCATGG 12345 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||| || || | ||||||||||||||||||||||||| ||| | | || || ||||||| Sbjct 12346 TAGCGCA-TAACGTACCATCGAAAGTTGATAGGGCAGACATTCG-AGGATCCGTCGCCGG 12403 Query 239 CTCAAGG--CCATGCGATTCGTTAAGTTATTATGAATCACCA-------AGGA---GCC- 285 | ||| | ||||| ||| | ||||| | |||||| ||| ||| Sbjct 12404 TGCCAGGACGCGTGCGA-TCGCTGTGTTATCCAGGTTCACCAGTCTTTGCGGACACGCCG 12462 Query 286 ----CCGAAGGGCGTTGG--TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTT 339 ||| | | ||| || || | |||||| || || | | |||||| | | Sbjct 12463 TGAGACGAGCCGGGCTGGTCTTGTTCCTATAATAAGCACGGCCTTCGTGGAGTCGGCGCT 12522 Query 340 TTTAGCATGTATTAGCTCTAGAATTACCACGGTTA-TCCATGTAGTAAGGTACTATCAAA 398 | |||||||||||||||||||||||||| |||| ||||||| | || | ||| || Sbjct 12523 TGACGCATGTATTAGCTCTAGAATTACCACAGTTATTCCATGTCG-GAGACTCGATC-AA 12580 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 | ||| ||||||||||||||||||||| ||||||| || || |||| |||||| Sbjct 12581 TGAACCATAACTGATTTAATGAGCCATCGCCAGTTTCGCTCGGACGA--GCTTGTACTTA 12638 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 500 ||| |||||||||||||| |||||| ||||||||||||||| Sbjct 12639 GACGTGCATGGCTTAATC-TTGAGAGCAGCATATGACTACTG 12679 >seq380862 Length=27576 Score = 295 bits (326), Expect = 2e-77 Identities = 391/530 (74%), Gaps = 37/530 (7%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTG--TATCAGTATTTATTGTCACTA 57 ||||||||||||||| || | || | |||||| ||| | | ||||| | ||||||| Sbjct 15361 GTACTCATTCCAATTGCAGGGCCTCGAAAGAGTCCTTCCTGTTGTTATTTTTCGTCACTA 15302 Query 58 --CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 15301 TACCTCCCCGTGT-------GGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 15249 Query 116 CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT-ACC 174 |||||||||||||||||||||||||||||||| | |||| | ||||||||| ||| ||| Sbjct 15248 CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACTTTGATTCTCTGTTACCCGT-GATCACC 15190 Query 175 ATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCG 234 ||||||| | || | ||||||||||||||||||||||||| ||| || || || ||| Sbjct 15189 ATGGTAGCCGCATAACGTACCATCGAAAGTTGATAGGGCAGACATTCGAGGGATCCGTCG 15130 Query 235 CCGG-CTCAAGGCCATGCGATTCGTTAAGTTAT-TATGAATCACCA--------AGGAGC 284 |||| |||| | ||||||| | | ||||| | | |||| ||| Sbjct 15129 CCGGTGCCAAGACGGTGCGATTGGCTGTGTTATCCACAGTTTACCAGTCTTTGCCGGACA 15070 Query 285 CCC-----GAAGGGC---GTTGGTTTTTTATCTAATAAATACAC-CCCTTCCGAAGTCGG 335 | | || | || | ||| || | |||||||| |||| | || |||||||| Sbjct 15069 CGCTGTGAGACGAGCCGGGCTGGCCTTGTTCCTAATAAAAACACGCTTTTGTGAAGTCGG 15010 Query 336 -GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT 394 | || |||||||||||||| |||||||| | ||||| ||||| | || | || Sbjct 15009 CGCTTGGGTGCATGTATTAGCTCAAGAATTACTAAAGTTATACATGTCGGGAGTCTCGAT 14950 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 ||| || ||||||||| | |||||| | ||| ||||| | | || |||| | Sbjct 14949 TTAATGCACTATAACTGATGAAGTGAGCCTTCCGCGGTTTCGTTCGA-CGA--GCTTGAA 14893 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| ||| ||||||||| |||||||| ||| |||||||||||| |||||| Sbjct 14892 CTTTGACGTGCATGGCTAAATCTTTGCGACGAGCATATGACTATTGGCAG 14843 >seq161471 Length=570 Score = 170 bits (188), Expect = 6e-40 Identities = 271/379 (72%), Gaps = 25/379 (7%) Strand=Plus/Plus Query 147 CCCTAATTCCCCGTTACCCGTTGAT-ACCATGGTAGGCCACTATCCTACCATCGAAAGTT 205 |||| |||| ||||||||||| ||| |||||||||| | || | |||||||||||||| Sbjct 1 CCCTGATTCTCCGTTACCCGT-GATCACCATGGTAGCCGCATAACGTACCATCGAAAGTT 59 Query 206 GATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTTAAGTT 264 ||||||||||| ||| || || || ||||||| | ||| |||||||||| | | ||| Sbjct 60 GATAGGGCAGACATTCGAGGGATCCGTCGCCGGTGCCAAGACCATGCGATTGGCTGTGTT 119 Query 265 ATTATGAATC-ACCAA--------GGAGCCCCG-----AAGGGC---GTTGGTTTTTTAT 307 || | | |||| ||| | | | | || | ||| || | Sbjct 120 ATCCACAGTTTACCAGTCTTTGCCGGACACGCTGTGATACGAGCCGGGCTGGCCTTGTTC 179 Query 308 CTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTA-GCATGTATTAGCTCTAGAATTA 365 |||||||| |||| | || |||||||| | || |||||||||||||||||||||| Sbjct 180 CTAATAAAAACACGCTTTTGTGAAGTCGGCGCTTGGGTGCATGTATTAGCTCTAGAATTA 239 Query 366 CCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 425 | | ||||| ||||| | || | || ||| ||| ||||||||| | |||||| | Sbjct 240 CTAAAGTTATACATGTCGGGAGTCTCGATTTAATGAACTATAACTGATAAAGTGAGCCTT 299 Query 426 TCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 485 ||| |||||| | | || |||| |||| ||| ||||||||| |||||||| ||| Sbjct 300 CCGCGGTTTCATTCGA-CGA--GCTTGAACTTTGACGTGCATGGCTAAATCTTTGCGACG 356 Query 486 AGCATATGACTACTGGCAG 504 |||||||||||| |||||| Sbjct 357 AGCATATGACTATTGGCAG 375 >seq36254 Length=78239 Score = 152 bits (168), Expect = 2e-34 Identities = 391/563 (69%), Gaps = 88/563 (16%) Strand=Plus/Minus Query 2 TACTCATTCCA-ATTACAAGACCCAAAA-GAGCCC-TGTATCAGTATTTATTGTCACTAC 58 ||||||||||| |||||| | | | ||| ||| || ||| | ||||| | |||||||| Sbjct 7400 TACTCATTCCACATTACAGGCCTCGAAACGAGTCCATGTTTGT-TATTTTTCGTCACTAC 7342 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||||| ||||||||| ||||||||| ||| ||||||||||||| |||||||| ||| Sbjct 7341 CTCCC-GTGTCGGGAGTGGGTAATT-GCG-GCCTGCTGCCTTC-TTGGATGTA----CCG 7290 Query 119 TTTCTCAGGCTC-CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 |||||||||||| |||||||||||| || | || ||||||| | || ||| Sbjct 7289 TTTCTCAGGCTCTCCTCTCCGGAAT-GACCACT----------TACCCGT-GCCAC-ATG 7243 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTG-ATAGGGCAGAAATTTG--AATGAACCATCG 234 ||||| || | ||||||||| |||| |||||| || | | | || || || ||| Sbjct 7242 GTAGGGTCATAACGTACCATCGA--GTTGGATAGGGTCGATAGTGGCGAAGGATCCGTCG 7185 Query 235 CCGGCT--CAAGGCCAT-GCGATTCGTTAAGTTATTATGAATC-------ACCA------ 278 |||| | || || | ||||| | | | | |||| || |||| Sbjct 7184 CCGGGATGCCAGACCGTAGCGATCAGGTGATGTGTTATCCATGCGAGTTTACCAGTCTTT 7125 Query 279 ---------------AG-GAGCC---CCGAAGGGC--GTTGGTTTTTTATCTAATAAATA 317 || ||| | ||| | || | || | || | |||||||| Sbjct 7124 TTCCGGACGACGCTCAGTGAGACGAGCCGGCGAGCTGGCTGCTATTGTTCCTAATAAAG- 7066 Query 318 CACCC-CTTCCGAAGTCGGGGTTTTTA-GCATGTATTAGCTCTAGAATTACCACGGTTAT 375 ||| | ||| | |||||| | || | |||||||||||||||||||||||||| | ||| Sbjct 7065 CACGCGCTTGTGGAGTCGGCGCTTGGACGCATGTATTAGCTCTAGAATTACCACAGATAT 7006 Query 376 CCA-TGT-----AGTAAGGT--ACTATCAAATAAACGATAACTGATTTAATGA-GCCATT 426 ||| ||| || || | || | ||| ||| |||||||||||||||| ||||| Sbjct 7005 CCATTGTCGGAGAGAAAAATTGACCTCCCAATGAACCATAACTGATTTAATGAGGCCATC 6946 Query 427 CGCAGTTTCACT--GTATAGATTGCTTATACTTAGACATGCATGGCTTAATC-TTTGAGA 483 ||||||||| || | || || | ||||||||| |||||||||||||| ||||||| Sbjct 6945 CGCAGTTTCGCTCAGGGACGAGTG--TGTACTTAGACGTGCATGGCTTAATCTTTTGAGA 6888 Query 484 CAAGC-ATATG-ACTACTGGCAG 504 ||||| ||||| ||| ||||||| Sbjct 6887 CAAGCAATATGCACT-CTGGCAG 6866 >seq95629 Length=55584 Score = 84.2 bits (92), Expect = 7e-14 Identities = 68/80 (85%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 419 GAGCCATTCGCAGTTTCACTGTATA-GATTGCTTATACTTAGACATGCATGGCTTAATCT 477 ||||||| ||||||||| || | || ||| ||||||||| ||||||||||||||| Sbjct 16299 GAGCCATCCGCAGTTTCGCTCGGGACGAA--CTTGTACTTAGACGTGCATGGCTTAATCT 16356 Query 478 TTGAGACAAGCATATGACTA 497 |||||||||||||||||||| Sbjct 16357 TTGAGACAAGCATATGACTA 16376 >seq408313 Length=13012 Score = 75.2 bits (82), Expect = 3e-11 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 || ||||||||||||||||||||||||||||||||||||||||| Sbjct 9257 ACGTGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 9300 >seq69709 Length=76306 Score = 75.2 bits (82), Expect = 3e-11 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 || ||||||||||||||||||||||||||||||||||||||||| Sbjct 3358 ACGTGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 3315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1500777679616