Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq545 253 3e-65 seq1038 192 9e-47 seq1951 122 1e-25 seq1937 100 4e-19 >seq545 Length=18043 Score = 253 bits (280), Expect = 3e-65 Identities = 196/228 (86%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 7636 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 7579 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||||| || ||| | || || | || ||||||| ||||| | ||||||| |||| Sbjct 7578 CTCGTTGATGAGCAATAGTTACAGAGCTCAATCCCCAGCACGACATAGTTTCAAAAGATT 7519 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | || |||||||| ||||||||||||| || ||||||||||||||||||| Sbjct 7518 ACCCAAGCTTCTCAGCCAAGGTTATAGACTCGTTGACTATGTCAGTGTAGCGCGCGTGCG 7459 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 7458 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT--AACTTC 7413 >seq1038 Length=1222 Score = 192 bits (212), Expect = 9e-47 Identities = 204/259 (79%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||| || |||||||||||||||| |||||| | Sbjct 835 GTACAAAGGGCAGGGACGTAATCAACGCGAGTTT-ATGACTCGCGCTTACTGGGAATT-C 778 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || |||| ||| | ||||| | ||||| | | ||||| | || Sbjct 777 CTCGTTCACGGGGAAAAATTACAAGCCCCGATCCCTAGCACGAAGGAGGTTCAACGGGTT 718 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||| ||| ||| | ||| | || || || ||| | | |||||||||||||||||| Sbjct 717 ACCCGGTCCTTGCGGACCAGGAGCGAGGACACGCTGATTCCTTCAGTGTAGCGCGCGTGC 658 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAA 237 ||||| |||||||||| |||||||||||||||||| || ||||| || |||| | |||| Sbjct 657 GGCCCCGAACATCTAACGGCATCACAGACCTGTTACTG-CTCAATCT--CGTGCGACTAA 601 Query 238 AAGGC-CATCTCCCTCGAA 255 | | | | | |||||| || Sbjct 600 ACGCCGCTTGTCCCTCTAA 582 >seq1951 Length=497474 Score = 122 bits (134), Expect = 1e-25 Identities = 133/169 (79%), Gaps = 7/169 (4%) Strand=Plus/Plus Query 91 ATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAG-AC 148 ||||| | ||||| | | ||||| | |||||||| ||| ||| | ||| | || || Sbjct 134909 ATCCCTAGCACGAAGGAGGTTCAACGGGTTACCCGGTCCTTGCGGACCAGGAGCGAGGAC 134968 Query 149 TCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 208 || ||| | | ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 134969 ACGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACC 135028 Query 209 TGTTATTGCCTCAAACTTCCGTG-GCCTAAAAGGC-CATCTCCCTCGAA 255 |||||||| ||||| || |||| | ||||| | | | | |||||| || Sbjct 135029 TGTTATTG-CTCAATCT--CGTGCGACTAAACGCCGCTTGTCCCTCTAA 135074 >seq1937 Length=536218 Score = 100 bits (110), Expect = 4e-19 Identities = 101/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 91 ATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAG-AC 148 ||||| | ||||| | | ||||| | |||||||| ||| ||| | | | | || || Sbjct 146120 ATCCCTAGCACGAAGGAGGTTCAACGGGTTACCCGGTCCTTGCGGACCATGAGCAAGGAC 146061 Query 149 TCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 208 || ||| | ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 146060 ACGCTGATTCTTTCAGTTTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACC 146001 Query 209 TGTTATTGC 217 ||||| ||| Sbjct 146000 TGTTACTGC 145992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751985495565