Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq545 89.7 3e-16 seq1038 71.6 8e-11 seq61 71.6 8e-11 >seq545 Length=18043 Score = 89.7 bits (98), Expect = 3e-16 Identities = 91/117 (78%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| | |||| | | || || || |||| ||| | Sbjct 7092 GAACCCAAAAACTTTGCTTTCGC-TAAGATTCTGAATAAGCCATAATGTACTTATC---C 7037 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | | |||||||||||||||| | ||||||||||||||||||||| ||||||||||| Sbjct 7036 AACCTCTAGTCGGCATAGTTTGCTGTTAAGACTACGACGGTATCTAATCGTCTTCGA 6980 >seq1038 Length=1222 Score = 71.6 bits (78), Expect = 8e-11 Identities = 86/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| |||||| |||| || | | |||| | |||| || ||| | | Sbjct 305 GAATCCAAAAACTTTGGTTTCCCGGAGGCTGCCCGCGGGGTCATTCGGACAACTCCCGCG 246 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||| ||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct 245 GATCGCCGGTCGACATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCGA 189 >seq61 Length=361180 Score = 71.6 bits (78), Expect = 8e-11 Identities = 86/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| |||||| |||| || | | |||| | |||| || ||| | | Sbjct 1244 GAATCCAAAAACTTTGGTTTCCCGGAGGCTGCCCGCGGGGTCATTCGGACAACTCCCGCG 1185 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||| ||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct 1184 GATCGCCGGTCGACATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCGA 1128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278394803490