Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq61 221 2e-55 seq545 170 4e-40 seq1038 163 5e-38 >seq61 Length=361180 Score = 221 bits (244), Expect = 2e-55 Identities = 207/257 (81%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACA 123 ||| | || ||||||||||||||||||||||| ||||||||||| | | ||| ||||| Sbjct 873 GCCGGAACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGTCTCGCTTGAATAGT 932 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC- 182 |||||||||||||||||||||| | |||||||||||||||||||| | ||| | | Sbjct 933 AGTGCATGGAATAATAGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAGCTCGA 990 Query 183 -GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 ||||||||||| ||||| | |||||| | ||||| ||| |||||||||||||| Sbjct 991 GGTAATGATTAAGAGGGACGGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCT 1050 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 ||||| ||||| ||||||||||||||| || ||||| |||||||||||||||| Sbjct 1051 TGGATCGCCGTAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA- 1109 Query 302 TGAACGAAAGTTAGGGG 318 |||||||||| || || Sbjct 1110 AGAACGAAAGTCAGAGG 1126 >seq545 Length=18043 Score = 170 bits (188), Expect = 4e-40 Identities = 189/247 (77%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGA 133 |||| ||| |||| |||||||| ||||||||| | || |||| |||||||||| Sbjct 6733 TTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTATAAGCCTGAATGTGTTAGCATGGA 6792 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAG-GACCGCCGTAATGATTA 192 ||||| |||| |||||| | ||||| |||||||| || |||| |||||||| | Sbjct 6793 ATAATGAAATAAGACGTGGCTCTATATTTCGTTGGTTTTAAGAGACCATTGTAATGATGA 6852 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||| | || ||||| | ||||| | | |||||||||||||||||||| | | Sbjct 6853 ATAGGAACGGTTGGGGGGATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGGATTGACCG 6912 Query 253 AAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| |||||||||||| || |||||| |||| ||||||||| ||||| | |||||| Sbjct 6913 AAGACAAACTACTGCGAAGGCATTTCACCCAGGACGTTTTCATTGATCAG-GGTCGAAAG 6971 Query 312 TTAGGGG 318 ||||||| Sbjct 6972 TTAGGGG 6978 >seq1038 Length=1222 Score = 163 bits (180), Expect = 5e-38 Identities = 153/190 (81%), Gaps = 5/190 (3%) Strand=Plus/Plus Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC--GTAATG 188 |||||||||||||||||| | |||||||||||||||||||| | ||| | | |||||| Sbjct 1 GGAATAATAGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAGCTCGAGGTAATG 58 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||| ||||| | |||||| | ||||| ||| ||||||||||||||||||| Sbjct 59 ATTAAGAGGGACGGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGATCG 118 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 ||||| ||||||||||||||| || ||||| |||||||||||||||| |||||| Sbjct 119 CCGTAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGA 177 Query 309 AAGTTAGGGG 318 |||| || || Sbjct 178 AAGTCAGAGG 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915181778368