Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq61 132 5e-29 seq1038 86.0 6e-15 seq545 77.0 3e-12 >seq61 Length=361180 Score = 132 bits (146), Expect = 5e-29 Identities = 140/179 (78%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCA 68 || ||||||||||||||||||||| | ||||||||||| | | ||| ||||| || Sbjct 879 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGTCTCGCTTGAATAGTAGTGCA 938 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||||||||||||| | |||||||||||||| ||||| | ||| | | ||||| Sbjct 939 TGGAATAATAGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAGCTCGAGGTAAT 996 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| || | ||| | |||||| | ||||| ||| | ||||||||||||||||| Sbjct 997 GATTAAGAGGGACGGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 1055 >seq1038 Length=1222 Score = 86.0 bits (94), Expect = 6e-15 Identities = 92/118 (78%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TAATG 128 |||||||||||||||||| | |||||||||||||| ||||| | ||| | | | ||||| Sbjct 1 GGAATAATAGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAGCTCGAGGTAATG 58 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 || || | ||| | |||||| | ||||| ||| | ||||||||||||||||| Sbjct 59 ATTAAGAGGGACGGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 116 >seq545 Length=18043 Score = 77.0 bits (84), Expect = 3e-12 Identities = 125/176 (71%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCATGGA 72 |||| ||| |||| |||| ||| ||||||||| | || |||| ||| |||||| Sbjct 6733 TTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTATAAGCCTGAATGTGTTAGCATGGA 6792 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAG-GACCGCCCGTAATGATA 131 ||||| |||| |||||| | ||||| || ||||| || |||| |||||||| Sbjct 6793 ATAATGAAATAAGACGTGGCTCTATATTTCGTTGGTTTTAAGAGACC-ATTGTAATGATG 6851 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 |||| | | || ||||| | ||||| | | | |||||||||||||||||| Sbjct 6852 AATAGGAACGGTTGGGGGGATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGGATT 6907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511990124640