Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq545 297 4e-78 seq1038 210 4e-52 seq1951 134 3e-29 seq1937 107 4e-21 >seq545 Length=18043 Score = 297 bits (328), Expect = 4e-78 Identities = 224/259 (86%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||| |||| | || | |||| | |||||| ||||||||||||||||||| Sbjct 7380 CTTCTTAGAGAAACTACCTGCGCTAAGCAGGATGAAGTT--AGGCAATAACAGGTCTGTG 7437 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||||| || |||||||| || | Sbjct 7438 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACATAGTCAACGAGTCTATAA 7497 Query 191 CCTTGGCCG-GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||||||| | |||| | ||||||||||| | ||||| ||||||||||||||| |||| | Sbjct 7498 CCTTGGCTGAGAAGCT-TGGGTAATCTTTTGAAACTATGTCGTGCTGGGGATTGAGCTCT 7556 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | || |||||||| |||||||||||| |||||||||||| ||||||||| |||||||| Sbjct 7557 GTAACTATTGCTCATCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGAT 7616 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 7617 TACGTCCCTGCCCTTTGTA 7635 >seq1038 Length=1222 Score = 210 bits (232), Expect = 4e-52 Identities = 239/313 (76%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTT-TGGCGG-GTCGCCGGCTTCTT 77 || |||||| || |||||||||||| | | | | | | ||| | ||| | |||||| Sbjct 524 GAACGAGACTCTAGCCTGCTAAATAGTCCGCCGATCGTCTTGCGTCGGCGCAGACTTCTT 583 Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 |||||||| | |||| | || || || | ||||| || |||||||||||||||||| Sbjct 584 AGAGGGACAAGCGGCGTTTAGTCGCACGA-GATTGAG-CAGTAACAGGTCTGTGATGCCG 641 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT-CACCTTG 195 |||||||||| ||||||||||||||||||||||| || || || || | | ||| | Sbjct 642 TTAGATGTTCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTCCTCGCTCCTGG 701 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 ||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| |||| Sbjct 702 TCCGCAAGGACCGGGTAACCCGTTGAACCTCCTTCGTGCTAGGGATCGGGGCTTGTAATT 761 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 || | | | |||||||||| || |||||||||| ||||| | | ||||||||||||||| Sbjct 762 TTTCCCCGTGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAACTCGCGTTGATTACGTC 821 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 822 CCTGCCCTTTGTA 834 >seq1951 Length=497474 Score = 134 bits (148), Expect = 3e-29 Identities = 170/226 (75%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTT-TGGCGG-GTCGCCGGCTTCTT 77 || |||||| || |||||||||||| | | | | | | ||| | ||| | |||||| Sbjct 135132 GAACGAGACTCTAGCCTGCTAAATAGTCCGCCGATCGTCTTGCGTCGGCGCAGACTTCTT 135073 Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 |||||||| | |||| | || || || | ||||| |||||||||||||||||||||| Sbjct 135072 AGAGGGACAAGCGGCGTTTAGTCGCACGA-GATTGAG-CAATAACAGGTCTGTGATGCCC 135015 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC-ATCACCTTG 195 |||||||||| ||||||||||||||||||||||| || || || || | | ||| | Sbjct 135014 TTAGATGTTCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTCCTCGCTCCTGG 134955 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 ||| |||| | |||||| | | || ||| ||||||| ||||| Sbjct 134954 TCCGCAAGGACCGGGTAACCCGTTGAACCTCCTTCGTGCTAGGGAT 134909 >seq1937 Length=536218 Score = 107 bits (118), Expect = 4e-21 Identities = 102/129 (79%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct 145992 GCAGTAACAGGTCTGTGATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTAAACTGAAAG 146051 Query 174 AGCCAACGAGTTCAT-CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232 | || || || | | | | | | ||| |||| | |||||| | | || ||| |||| Sbjct 146052 AATCAGCGTGTCCTTGCTCATGGTCCGCAAGGACCGGGTAACCCGTTGAACCTCCTTCGT 146111 Query 233 GCTGGGGAT 241 ||| ||||| Sbjct 146112 GCTAGGGAT 146120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947181141248