Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq545 728 0.0 seq61 297 6e-78 seq515 217 5e-54 >seq545 Length=18043 Score = 728 bits (806), Expect = 0.0 Identities = 484/537 (90%), Gaps = 3/537 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 11208 CTTTTATTCTACGCGAGATTTCTGTTCTCGCTGAGTCCCCCTTAGGACACCTGCGTTATT 11149 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||| ||||||||||| ||| || || Sbjct 11148 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACTTGACAATGTCAATAACGTGGGTC 11089 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || |||| ||||| |||||| ||| | |||||| ||| | || | | ||| Sbjct 11088 ACGCCATAAAGGCGCTTAAAACCAGAAGGTGGGCCGTGAAGCCCAATCCCACATGATTAT 11029 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||| Sbjct 11028 TTAAGTAAAAAAACAATAAGGGTAGTGGTATTTCATTGGCGCCGAA---GCTCCCACTTA 10972 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 10971 TGCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 10912 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 10911 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 10852 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10851 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 10792 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10791 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 10732 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 10731 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 10675 >seq61 Length=361180 Score = 297 bits (328), Expect = 6e-78 Identities = 175/182 (96%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310 |||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||||| Sbjct 57805 ACACCTCTCATGTCTCTTCACAAAGTTGGACCAGAGTCAAGCTCAACAGGGTCTTCTTTC 57746 Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57745 CCCGCTAATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 57686 Query 371 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57685 CAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGC 57626 Query 431 TA 432 || Sbjct 57625 TA 57624 Score = 136 bits (150), Expect = 1e-29 Identities = 86/93 (92%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 |||||||||||||||||||||||||||||||||| |||||||||| | |||||||| Sbjct 46162 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT-----GAATTTCTTCCCGTTGACATT 46108 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 ||||||||||||||||||||||||||||||||| Sbjct 46107 CAGAGCACTGGGCAGAAATCACATTGCGTCAAC 46075 Score = 116 bits (128), Expect = 1e-23 Identities = 64/64 (100%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 49580 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 49521 Query 429 GCTA 432 |||| Sbjct 49520 GCTA 49517 Score = 95.1 bits (104), Expect = 4e-17 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 440 AGAGTCATAGTTACTCCCGCCG-TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 |||||||||||||| ||||| | |||||||||||| | ||||||||||||| ||||||| Sbjct 51606 AGAGTCATAGTTACACCCGCTGGTTTACCCGCGCTCGCTTGAATTTCTTCAGGTTGACAT 51547 Query 499 TCAGAGCACTGG 510 |||||||||||| Sbjct 51546 TCAGAGCACTGG 51535 >seq515 Length=3090232 Score = 217 bits (240), Expect = 5e-54 Identities = 148/165 (90%), Gaps = 6/165 (4%) Strand=Plus/Plus Query 271 CAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCC 330 |||||||||| ||| || |||||||||||||||| || ||||| |||| |||||||| Sbjct 1181834 CAAAGTCGGATGAGAATCGAGCTCAACAGGGTCTT---TCTCCGCTAATTCTGCCAAGCC 1181890 Query 331 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA---TAGGGACAGTGGGAATCTCGTTA 387 |||||||||||||||||||| |||||||||| || |||||||||||||||||| |||| Sbjct 1181891 CGTTCCCTTGGCTGTGGTTTTGCTAGATAGTCGACGATAGGGACAGTGGGAATCTTGTTA 1181950 Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1181951 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAATTGGCTA 1181995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635167443168