Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq545 576 4e-162 seq61 448 1e-123 seq694 437 3e-120 seq1523 352 9e-95 seq515 167 7e-39 seq1761 118 3e-24 seq1682 91.5 4e-16 >seq545 Length=18043 Score = 576 bits (638), Expect = 4e-162 Identities = 441/515 (86%), Gaps = 13/515 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| ||||||| ||||| |||||| || |||||||||||||||||| Sbjct 6500 GTACTCATTCCAATTGCAAGACCTAAAAG-GCCCTGCATTGTTATTTATTGTCACTACCT 6442 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6441 CCCCGAATTGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 6382 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||| | || ||| Sbjct 6381 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTGGTAGGCAATGTA 6322 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| ||||| ||| ||| || |||||||||||||| | ||||||||| ||||| || Sbjct 6321 AGCCTCTATCTTACAATCTTAACCTGATAGGGCAGAAAATCGAATGAACCGTCGCCAGCA 6262 Query 241 CAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGA---GCCCCGAAGGGC- 294 |||||||||||||| | || | ||||||||||||||||| | | | || | Sbjct 6261 CAAGGCCATGCGATCAGCATTGAATTATTATGAATCACCAAAAAACTGGCTTTAACACCA 6202 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGG--TTTTTAGCATGTAT 351 ||||| ||||| ||||||| | ||||||||||||||||| || ||| | |||||||| Sbjct 6201 GGTTGG-CTTTTACCTAATAAGTGCACCCCTTCCGAAGTCGAGGCTTTTGTTGCATGTAT 6143 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411 ||||||||||||||||||||||||||| ||||||| | | | ||| || | ||||||| Sbjct 6142 TAGCTCTAGAATTACCACGGTTATCCAAGTAGTAATGAATTGTCATGTAGATCATAACTG 6083 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGA--TTGCTTATACTTAGACATGCATGG 469 |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct 6082 ATTTAATGAGCCATTCGCAGTTTCACAGTATAGAATTTGTTTATACTTAGACATGCATGG 6023 Query 470 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||| Sbjct 6022 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 5988 >seq61 Length=361180 Score = 448 bits (496), Expect = 1e-123 Identities = 415/519 (80%), Gaps = 18/519 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || || |||| || ||||| ||||| | ||||||||| Sbjct 656 GTACTCATTCCGATTACGGGGCCTCATTAGAGTCCCGTATCGTTATTTTTCGTCACTACC 597 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| | || ||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 596 TCCCTGCGTTAGGAGTGGGCAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 537 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| |||||||||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct 536 TTCTCATGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTTACTACCATGGT 477 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | | ||||||||||||||||||||||| | | ||||| || | ||||| || Sbjct 476 AGGCAAGTCGCGTACCATCGAAAGTTGATAGGGCACACACTTGAAAGATACGTCGCCAGC 417 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCA--AGGA--GCCC---CGAA 290 || ||||| |||||| | | |||||||| || |||||| |||| | || |||| Sbjct 416 TCGAGGCCGTGCGATCTGCTCAAAGTTATTCAGAGTCACCAATAGGACGGTCCTTGCGAA 357 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-----GAAGTCGGGGTTTTTAGC 345 || | | |||| |||||||||| | | | |||| | || | ||||| || Sbjct 356 --CCGATTGGTTTTGATCTAATAAACGCGCTCGTTCCAGCTAGGGTCCGAGCTTTTTTGC 299 Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGA 405 |||||||||||||||||||||||| |||||||| |||| || |||| ||| || ||| | Sbjct 298 ATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGAAATGTACGATCTAAGAAATCA 239 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465 | || ||||||||||||||||| ||||| || | | | || | ||||||||||| Sbjct 238 TGGGTGGCCTAATGAGCCATTCGCAGCTTCACCGTGT-TAAAGTTTGTGCTTAGACATGC 180 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| Sbjct 179 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 141 >seq694 Length=1553 Score = 437 bits (484), Expect = 3e-120 Identities = 395/491 (80%), Gaps = 17/491 (3%) Strand=Plus/Plus Query 28 AGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCG 87 |||| || ||||| ||||| | ||||||||||||| | || ||| ||||||||||||| Sbjct 8 AGAGTCCCGTATCGTTATTTTTCGTCACTACCTCCCTGCGTTAGGAGTGGGTAATTTGCG 67 Query 88 CGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAAC 147 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 68 CGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATCGAAC 127 Query 148 CCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGA 207 ||| |||| |||||||||||| ||||||||||||| | | | |||||||||||||||| Sbjct 128 CCTGATTCTCCGTTACCCGTTACTACCATGGTAGGCAAGTCGCGTACCATCGAAAGTTGA 187 Query 208 TAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTT--AAGTTA 265 ||||||| | | ||||| || | ||||| |||| ||||| |||||| | | |||||| Sbjct 188 TAGGGCACACACTTGAAAGATACGTCGCCAGCTCGAGGCCGTGCGATCTGCTCAAAGTTA 247 Query 266 TTATGAATCACCA--AGGA--GCCC---CGAAGGGCGTTGGTTTTTTATCTAATAAATAC 318 || || |||||| |||| | || |||| || | | |||| |||||||||| | Sbjct 248 TTCAGAGTCACCAATAGGACGGTCCTTGCGAA--CCGATTGGTTTTGATCTAATAAACGC 305 Query 319 ACCCCTTCC-----GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373 | | |||| | || | ||||| |||||||||||||||||||||||||| ||| Sbjct 306 GCTCGTTCCAGCTAGGGTCCGAGCTTTTTTGCATGTATTAGCTCTAGAATTACCACAGTT 365 Query 374 ATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTT 433 ||||| |||| || |||| ||| || ||| || || ||||||||||||||||| | Sbjct 366 ATCCAAGTAGAAATGTACGATCTAAGAAATCATGGGTGGCCTAATGAGCCATTCGCAGCT 425 Query 434 TCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 493 |||| || | | | || | ||||||||||||||||||||||||||||||||||||||| Sbjct 426 TCACCGTGT-TAAAGTTTGTGCTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 484 Query 494 ACTACTGGCAG 504 ||||||||||| Sbjct 485 ACTACTGGCAG 495 >seq1523 Length=1042 Score = 352 bits (390), Expect = 9e-95 Identities = 398/520 (77%), Gaps = 26/520 (5%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||||||||||||| | || | ||||| || |||| |||| | ||||||||||| Sbjct 187 ACTCATTCCAATTACGGGGCCTCGAAAGACGCCCGTATTGTTATTATTCGTCACTACCTC 246 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || ||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct 247 CCTGTGTCAGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTGGCCGTTT 306 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 |||||||||||||||||||||| |||||| |||||||||||||||||| | |||||||| Sbjct 307 CTCAGGCTCCCTCTCCGGAATCAAACCCTGATTCCCCGTTACCCGTTGTCAGCATGGTAG 366 Query 182 GCC-ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 || || ||||||||| | |||||||||||| ||| ||| ||| ||||| || Sbjct 367 TCCTTCTCGACTACCATCG-ACTCTGATAGGGCAGACATTCGAAAGAATTGTCGCCAGCG 425 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCG-----AAGGG 293 | |||||| |||||| || ||||| || ||||| | ||||||| | | Sbjct 426 CAAAGGCCGTGCGATCCGCATGGTTATCCAGAGTCACCTCAACAGCCCCGGGTTTGACGC 485 Query 294 CGTTG-GTTTTTTATCTAATAAATACAC----CCCTTCCGAAGTCGG-GGTTTTTAGCAT 347 || | | || || ||||| | | | ||||| || ||||| | || |||| Sbjct 486 CGGGGTGCGTTCGGTCCAATAACTGCGCTCGTCCCTTGCG--GTCGGAGCTTCGGTGCAT 543 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATA 407 ||||||||||||||||| ||| ||||||||| | | | |||| || || ||| ||| Sbjct 544 GTATTAGCTCTAGAATTGCCAGGGTTATCCA-CTTGGGATGTACGTTCTAAGGAACCATA 602 Query 408 ACTGATTTAATGAGCCATTCGCAGTTT---CACTGTATAGATTGCTTATACTTAGACATG 464 |||||| ||||||||||| |||||||| || || ||||| |||| | || || Sbjct 603 ACTGATCTAATGAGCCATCCGCAGTTTTTCCATGCTAGGGATTG----TACTGACACGTG 658 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||| ||||||||||||||||||||| Sbjct 659 CATGGCTTAATCTTTGAGTCAAGCATATGACTACTGGCAG 698 >seq515 Length=3090232 Score = 167 bits (184), Expect = 7e-39 Identities = 208/279 (75%), Gaps = 16/279 (6%) Strand=Plus/Minus Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCC-------CGAA 290 |||| ||||| ||||||| | ||||||| || ||||||| || | |||| Sbjct 2425419 GCTCGAGGCCGTGCGATTTACTCAGTTATTCAGAGTCACCAATAAGGCGGTCCTTGCGAA 2425360 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAA---GTCGGGG-TTTTTAGC 345 | |||||||| |||||||||| | | |||| ||| ||| | ||||| || Sbjct 2425359 CCGA-TTGGTTTTG-ATCTAATAAACGCGCTTGTTCCAGAAAGGGTCCAAGCTTTTTTGC 2425302 Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGA 405 ||||||||||||||||||| |||| |||| ||| |||| || |||| ||| || ||| | Sbjct 2425301 ATGTATTAGCTCTAGAATTGCCACAGTTAACCAAGTAGAAATGTACGATCTAAGAAATCA 2425242 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465 | || ||||||||||||||||| ||||| || | | | | |||||| |||| Sbjct 2425241 TTGGTGGCCTAATGAGCCATTCGCAGCTTCACCGTGTTAA--GTTCGGGCTTAGATATGC 2425184 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| Sbjct 2425183 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 2425145 >seq1761 Length=6268964 Score = 118 bits (130), Expect = 3e-24 Identities = 127/167 (76%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAA 397 ||||| |||||||| |||| |||||||| ||| |||||| | |||| || ||| ||| | Sbjct 924892 TTTTTTGCATGTATGAGCTATAGAATTATCACAGTTATCTAAGTAGAAATTTACGATCCA 924951 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 | || || || |||||| ||||| |||| |||| || | || | || | ||| Sbjct 924952 AAAATTCATGGGTGGCCTAATGAACCATTTGCAGCTTCATCGTGTT-ATAGTTTGTGCTT 925010 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||| | ||||||| ||| ||||||||||||||||||| |||| Sbjct 925011 AGACATGTAGAGCTTAATTTTTAAGACAAGCATATGACTACTAGCAG 925057 >seq1682 Length=7473 Score = 91.5 bits (100), Expect = 4e-16 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 320 CCCCTTCCGAAGTCGGGGTTTTTA--GCATGTATTAGCTCTAGAATTACCACGGTTATCC 377 ||||||||||||||| || ||||| ||| ||| ||||||| ||||||||||| ||||| Sbjct 7466 CCCCTTCCGAAGTCGAGGCTTTTATTGCACATATCAGCTCTATAATTACCACGGCTATCC 7407 Query 378 ATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATT 426 | ||||||| | | || || | ||| || ||||||||||||||| Sbjct 7406 AAGTAGTAATGCTTTGACATGTAGATAATAGCTCATTTAATGAGCCATT 7358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510369927936