Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1829 111 1e-19 seq514 84.2 2e-11 >seq1829 Length=5883334 Score = 111 bits (122), Expect = 1e-19 Identities = 96/117 (82%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 61490 GATTGCTGGCATTTGCGGTGGTCGAGGG--TGTATTTTTCAGTGGATCGTTTGCCGCAAT 61547 ||||| |||||||||| | ||||| || | | |||||||| |||| ||||| | || Sbjct 4218373 GATTGGTGGCATTTGCAGCTGTCGAAGGAATCTTTTTTTCAG--GATCTTTTGCATCTAT 4218316 Query 61548 CTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGAT 61604 ||||||||||||||||||||| | ||||||||||| || |||||||||||| |||| Sbjct 4218315 ATTTTGGTTGAAGAAACGTGGAGTGATGCCCGGTCTAACGTTCAGCAATGAGCTGAT 4218259 >seq514 Length=9866887 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| || ||||||||||||||| |||||||||| || ||||||||||| || || | Sbjct 8596363 CATAAACAGGTCAGGTATCCAGAGGCCGTAGAAGAGGTCACGTGCTCGTTGTTCTTCTAC 8596422 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || |||||| | | || | ||| | | |||||| ||||| ||||||| ||| Sbjct 8596423 CCCACTGTTTTTGTGAAGGTTCAAGAAGTTTATGATGTCACTGTGCCAGGGTTCCAAGTA 8596482 Query 66460 GATGGCGAA 66468 || | ||| Sbjct 8596483 AATAGAGAA 8596491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558352888240