Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10669 275 9e-72 seq939 275 9e-72 seq2478 269 4e-70 seq9592 259 7e-67 seq8438 221 2e-55 seq1819 140 5e-31 seq102 95.1 2e-17 >seq10669 Length=16854 Score = 275 bits (304), Expect = 9e-72 Identities = 196/220 (89%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct 3188 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 3245 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| | || ||| ||||||||||||| |||||||||||| ||| ||||| |||||| Sbjct 3246 CTCGTTCATGATCAATAATTGCAATGATCAATCCCCATCACGTCGAACTTTCATAAGATT 3305 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| |||| | ||||||| || || | |||||||||||||||||| Sbjct 3306 ACCCGAACCTTTCGGTTAAGGATA-AGACTCGCTGCATTCGACAGTGTAGCGCGCGTGCG 3364 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||||||||||||||||||||||||||||||||||||||| Sbjct 3365 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 3404 Score = 86.0 bits (94), Expect = 9e-15 Identities = 60/66 (91%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 142 GATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATC 201 |||||||||| || || | |||||||||||||||||||||||| ||||||||||||||| Sbjct 13349 GATAGACTCGCTGCATCGA-CAGTGTAGCGCGCGTGCGGCCCAG-ACATCTAAGGGCATC 13406 Query 202 ACAGAC 207 |||||| Sbjct 13407 ACAGAC 13412 >seq939 Length=165061 Score = 275 bits (304), Expect = 9e-72 Identities = 196/220 (89%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct 143916 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 143973 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| | || ||| ||||||||||||| |||||||||||| ||| ||||| |||||| Sbjct 143974 CTCGTTCATGATCAATAATTGCAATGATCAATCCCCATCACGTCGAACTTTCATAAGATT 144033 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| |||| | ||||||| || || | |||||||||||||||||| Sbjct 144034 ACCCGAACCTTTCGGTTAAGGATA-AGACTCGCTGCATTCGACAGTGTAGCGCGCGTGCG 144092 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||||||||||||||||||||||||||||||||||||||| Sbjct 144093 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 144132 Score = 275 bits (304), Expect = 9e-72 Identities = 196/220 (89%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct 150830 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 150773 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| | || ||| ||||||||||||| |||||||||||| ||| ||||| |||||| Sbjct 150772 CTCGTTCATGATCAATAATTGCAATGATCAATCCCCATCACGTCGAACTTTCATAAGATT 150713 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| |||| | ||||||| || || | |||||||||||||||||| Sbjct 150712 ACCCGAACCTTTCGGTTAAGGATA-AGACTCGCTGCATTCGACAGTGTAGCGCGCGTGCG 150654 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||||||||||||||||||||||||||||||||||||||| Sbjct 150653 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 150614 >seq2478 Length=98033 Score = 269 bits (298), Expect = 4e-70 Identities = 195/220 (89%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| | |||||||||| |||||||||||||||||||||||| | Sbjct 67672 GTACAAAGGGCAGGGACGTAATTAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 67615 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| | || ||| ||||||||||||| |||||||||||| ||| ||||| |||||| Sbjct 67614 CTCGTTCATGATCAATAATTGCAATGATCAATCCCCATCACGTCGAACTTTCATAAGATT 67555 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| |||| | ||||||| || || | |||||||||||||||||| Sbjct 67554 ACCCGAACCTTTCGGTTAAGGATA-AGACTCGCTGCATTCGACAGTGTAGCGCGCGTGCG 67496 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||||||||||||||||||||||||||||||||||||||| Sbjct 67495 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 67456 >seq9592 Length=21221 Score = 259 bits (286), Expect = 7e-67 Identities = 189/214 (88%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct 2421 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 2364 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| | || ||| ||||||||||||| |||||||||||| ||| ||||| |||||| Sbjct 2363 CTCGTTCATGATCAATAATTGCAATGATCAATCCCCATCACGTCGAACTTTCATAAGATT 2304 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| |||| | ||||||| || || | |||||||||||||||||| Sbjct 2303 ACCCGAACCTTTCGGTTAAGGATA-AGACTCGCTGCATTCGACAGTGTAGCGCGCGTGCG 2245 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 ||||||||||||||||||| |||||||||||||| Sbjct 2244 GCCCAGAACATCTAAGGGCGTCACAGACCTGTTA 2211 >seq8438 Length=26807 Score = 221 bits (244), Expect = 2e-55 Identities = 185/220 (84%), Gaps = 5/220 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| |||| |||||| ||| ||||||||| |||||||||| ||||||||||| | Sbjct 3850 GTACAAAGAGCAGAGACGTAATCATCGCGAGCTT-ATGACTCGCGTGTACTAGGAATT-C 3907 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| | | ||| ||||||||| ||| |||||||||||| ||| ||||| |||||| Sbjct 3908 CTCGTTCATTATCAATAATTGCAATAATCGATCCCCATCACGTCGAACTTTCATAAGATT 3967 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| || | || | |||| | ||||||| || || | |||||||||||||||||| Sbjct 3968 ACCCGAACTTTTCTGTTAAGGATA-AGACTCGCTGCATTCGACAGTGTAGCGCGCGTGCG 4026 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||||| |||||||||| |||||||||||||||||||||| Sbjct 4027 GCCCAG-ACATCTAAGGACATCACAGACCTGTTATTGCCT 4065 >seq1819 Length=118955 Score = 140 bits (154), Expect = 5e-31 Identities = 110/129 (85%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| |||||||||| ||||||||||||| | Sbjct 57034 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTCGCACTTACTAGGAATT-C 56977 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || ||| ||||||||||||| ||| |||||||| ||| ||| | |||||| Sbjct 56976 CTCGTTCATGATCAATAATTGCAATGATCAATCGCCATCACGTCGAACTTTTATAGATTA 56917 Query 121 CCCGGACCT 129 || | |||| Sbjct 56916 CCTGAACCT 56908 >seq102 Length=339552 Score = 95.1 bits (104), Expect = 2e-17 Identities = 62/66 (94%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||| Sbjct 119008 GTACAAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCGCGCTTGCTAGGAA-TTC 119065 Query 61 CTCGTT 66 |||||| Sbjct 119066 CTCGTT 119071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751847626940