Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq10669 118 6e-25 seq109 75.2 6e-12 >seq10669 Length=16854 Score = 118 bits (130), Expect = 6e-25 Identities = 97/117 (83%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| |||||| |||| ||||||||||||| | |||| || ||||| | || Sbjct 3714 GAATCCAAAAACTTTGGTTTCCCGTAAGGTGCCGACGGGGTCATAAA-ATAACGCCCGCC 3772 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||| ||| ||||| ||||| |||| |||||||||||||||||||||| Sbjct 3773 GATCCCTAGTCGACATCGTTTATGGTTAGAACTAGGACGGTATCTGATCGTCTTCGA 3829 Score = 118 bits (130), Expect = 6e-25 Identities = 97/117 (83%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| |||||| |||| ||||||||||||| | |||| || ||||| | || Sbjct 13730 GAATCCAAAAACTTTGGTTTCCCGTAAGGTGCCGACGGGGTCATAAA-ATAACGCCCGCC 13788 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||| ||| ||||| ||||| |||| |||||||||||||||||||||| Sbjct 13789 GATCCCTAGTCGACATCGTTTATGGTTAGAACTAGGACGGTATCTGATCGTCTTCGA 13845 >seq109 Length=334349 Score = 75.2 bits (82), Expect = 6e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||| ||| ||||| ||||| |||| ||||||||||||| |||||||| Sbjct 219587 CCGATCCCTAGTCGACATCGTTTATGGTTAGAACTAGGACGGTATCTGATTGTCTTCGA 219529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278345409240