Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq10669 280 3e-73 seq8230 280 3e-73 seq109 271 1e-70 seq9416 233 4e-59 seq17268 141 2e-31 seq1318 120 6e-25 seq6964 113 8e-23 >seq10669 Length=16854 Score = 280 bits (310), Expect = 3e-73 Identities = 213/249 (86%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 ||| ||||||||||||||||||||||||||||||||||| || ||| |||||||| |||| Sbjct 14093 GACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTTCGCTTGAATACATGAGCA 14034 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct 14033 TGGAATAATGGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAAGTAATGA 13975 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||||| | |||||| || ||||| |||||||||||||||||||||||||| Sbjct 13974 TTAAGAGGGACAAACGGGGGCATCTGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTG 13915 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||| ||| ||||||||||| | ||||| ||||||||||||||| ||||||| Sbjct 13914 CGAAAGACAAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCA-AGAACGAA 13856 Query 310 AGTTAGGGG 318 |||||| || Sbjct 13855 AGTTAGAGG 13847 Score = 273 bits (302), Expect = 4e-71 Identities = 213/250 (85%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGC-AGGCCTTTGCTCGAATACATTAGC 128 ||| ||||||||||||||||||||||||||||||| |||| || ||| |||||||| ||| Sbjct 4078 GACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCTAGGCTTTCGCTTGAATACATGAGC 4019 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 |||||||||| ||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 4018 ATGGAATAATGGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAAGTAATG 3960 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||| ||||| | |||||| || ||||| |||||||||||||||||||||||||| Sbjct 3959 ATTAAGAGGGACAAACGGGGGCATCTGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTT 3900 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 ||||| ||| ||||||||||| | ||||| ||||||||||||||| |||||| Sbjct 3899 GCGAAAGACAAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCA-AGAACGA 3841 Query 309 AAGTTAGGGG 318 ||||||| || Sbjct 3840 AAGTTAGAGG 3831 >seq8230 Length=28071 Score = 280 bits (310), Expect = 3e-73 Identities = 213/249 (86%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 ||| ||||||||||||||||||||||||||||||||||| || ||| |||||||| |||| Sbjct 26988 GACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTTCGCTTGAATACATGAGCA 27047 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct 27048 TGGAATAATGGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAAGTAATGA 27106 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||||| | |||||| || ||||| |||||||||||||||||||||||||| Sbjct 27107 TTAAGAGGGACAAACGGGGGCATCTGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTG 27166 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||| ||| ||||||||||| | ||||| ||||||||||||||| ||||||| Sbjct 27167 CGAAAGACAAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCA-AGAACGAA 27225 Query 310 AGTTAGGGG 318 |||||| || Sbjct 27226 AGTTAGAGG 27234 >seq109 Length=334349 Score = 271 bits (300), Expect = 1e-70 Identities = 211/249 (85%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 ||| ||||||||||||||||||||||||||||||||||| || ||| |||||||| |||| Sbjct 219281 GACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTTCGCTTGAATACATGAGCA 219340 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||||||||| | |||| ||||||||||||||||||||||| ||||||| Sbjct 219341 TGGAATAATGGAATAGGACTTT-GGTTTTATTTTGTTGGTTTCTAGGACCGAAGTAATGA 219399 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||||| | |||||| || ||||| |||||||||||||||||||||||||| Sbjct 219400 TTAAGAGGGACAAACGGGGGCATCTGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTG 219459 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||| ||| ||||| ||||| | ||||| ||||||||||||||| ||||||| Sbjct 219460 CGAAAGACAAACAACTGCAAAAGCACTTGCCAAGAGTGTTTTCATTAATCA-AGAACGAA 219518 Query 310 AGTTAGGGG 318 |||||| || Sbjct 219519 AGTTAGAGG 219527 >seq9416 Length=21965 Score = 233 bits (258), Expect = 4e-59 Identities = 203/249 (82%), Gaps = 5/249 (2%) Strand=Plus/Minus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 ||| ||||||||||||||||||||||||||||||||||| || ||| ||| || || | Sbjct 13825 GACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTTCGCTTGAA---ATGAGTA 13769 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||||||||| | |||||||||||||||||||||| ||| | ||||||| Sbjct 13768 TGGAATAATGGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTACGACTGAAGTAATGA 13710 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||| | | ||||| || ||||| |||||||||||||||||||||||||| Sbjct 13709 TTAAGAGGTACAAATGGGGGCATCTGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTG 13650 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | ||||| ||| |||| |||||| | ||||| ||||||||||||||| ||| ||| Sbjct 13649 TGAAAGACAAACAACTGTGAAAGCACTTGCCAAGAGTGTTTTCATTAATCA-AGAATGAA 13591 Query 310 AGTTAGGGG 318 || ||| || Sbjct 13590 AGCTAGAGG 13582 >seq17268 Length=3537 Score = 141 bits (156), Expect = 2e-31 Identities = 109/123 (89%), Gaps = 5/123 (4%) Strand=Plus/Minus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 ||| |||||||||||||||||||||||||||||||| || || ||| |||||||| |||| Sbjct 2556 GACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCA-GCTTTCGCTTGAATACATGAGCA 2498 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||| ||||||||| | ||||||| |||||||||||||||||||| || |||| Sbjct 2497 TGGAATAATGGAATAGGAC-TTTGGTTCTA-TTTGTTGGTTTCTAGGACCG-AGT-ATGA 2442 Query 190 TTA 192 ||| Sbjct 2441 TTA 2439 >seq1318 Length=142511 Score = 120 bits (132), Expect = 6e-25 Identities = 122/158 (77%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 161 TTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTC 220 ||||||||||||||||||| ||||||||||| ||||| | |||| | || ||||| Sbjct 73837 TTTGTTGGTTTCTAGGACCAAAGTAATGATTAAAAGGGAAAAACGGGAGCATCTGTATTT 73896 Query 221 AATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACC 280 ||| ||||||||||| ||||||||||| ||||| || |||| ||||| | || Sbjct 73897 CATTTTCAGAGGTGAAGTTCTTGGATTTGCGAAAGACAAATAACTGGAAAAGCACTTGCC 73956 Query 281 AAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || |||||| |||||| | ||||||||||||| || Sbjct 73957 AAAAGTGTTTTTATTAATTA-AGAACGAAAGTTAGAGG 73993 >seq6964 Length=36446 Score = 113 bits (124), Expect = 8e-23 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 154 GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTC 213 ||||||||||||||||||||||||||| ||||||||||| | ||| | |||||| || Sbjct 33687 GTTCTATTTTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAAGGACAAACGGGGGCATC 33746 Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||| |||||||||||||||||||||||||| Sbjct 33747 TGTATTTTGTTGTCAGAGGTGAAATTCTTGGATTT 33781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915008576768