Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq10669 244 4e-62 seq109 235 2e-59 seq2200 215 2e-53 seq377 208 3e-51 seq17268 201 5e-49 seq16931 201 5e-49 seq3209 199 2e-48 seq17257 194 7e-47 seq543 165 3e-38 seq10605 149 3e-33 seq5008 120 1e-24 seq1388 78.8 4e-12 >seq10669 Length=16854 Score = 244 bits (270), Expect = 4e-62 Identities = 242/311 (78%), Gaps = 33/311 (11%) Strand=Plus/Minus Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC- 462 ||| ||||||||| |||||||||||||||||||||||| | ||||||| || ||||| | Sbjct 1313 GCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTCTTCGGGTGACT 1254 Query 463 -AAACCCGTGCGCGTAATGAAAGTGAACG------------GAGGTGGGAAC---CCG-- 504 |||||| | || ||||||||| || | || ||| || | ||| Sbjct 1253 GAAACCCTCGGGCACAATGAAAGTAAAGGCTCGCAAGAGCTGAAGTGAGATCTTGCCGCA 1194 Query 505 ------TGAGG---GTGCACCATCGACCGATCCTGATGT---CTTCGGATGGATTTGAGT 552 || || | ||| ||| |||||| ||| | | ||| | | || ||||||| Sbjct 1193 CTCCAATGCGGTGAGCGCATCATTGACCGA-CCTATTCTACTCTTAGAAAGG-TTTGAGT 1136 Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 ||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 1135 AAGAGCACATCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGAGTAGGGTGAAGCCAG 1076 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 |||||||||||||||||||||| |||| ||||| |||||||||||||||||||| ||| | Sbjct 1075 AGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTGAG 1016 Query 673 TATAGGGGCGA 683 ||||||||||| Sbjct 1015 TATAGGGGCGA 1005 Score = 244 bits (270), Expect = 4e-62 Identities = 242/311 (78%), Gaps = 33/311 (11%) Strand=Plus/Minus Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC- 462 ||| ||||||||| |||||||||||||||||||||||| | ||||||| || ||||| | Sbjct 12270 GCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTCTTCGGGTGACT 12211 Query 463 -AAACCCGTGCGCGTAATGAAAGTGAACG------------GAGGTGGGAAC---CCG-- 504 |||||| | || ||||||||| || | || ||| || | ||| Sbjct 12210 GAAACCCTCGGGCACAATGAAAGTAAAGGCTCGCAAGAGCTGAAGTGAGATCTTGCCGCA 12151 Query 505 ------TGAGG---GTGCACCATCGACCGATCCTGATGT---CTTCGGATGGATTTGAGT 552 || || | ||| ||| |||||| ||| | | ||| | | || ||||||| Sbjct 12150 CTCCAATGCGGTGAGCGCATCATTGACCGA-CCTATTCTACTCTTAGAAAGG-TTTGAGT 12093 Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 ||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 12092 AAGAGCACATCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGAGTAGGGTGAAGCCAG 12033 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 |||||||||||||||||||||| |||| ||||| |||||||||||||||||||| ||| | Sbjct 12032 AGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTGAG 11973 Query 673 TATAGGGGCGA 683 ||||||||||| Sbjct 11972 TATAGGGGCGA 11962 Score = 205 bits (226), Expect = 4e-50 Identities = 153/178 (86%), Gaps = 1/178 (1%) Strand=Plus/Minus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 ||||| | ||| | |||||| |||||||||||||||||| | |||||||||||||| | | Sbjct 12848 GAAGCGCTTTCTATGAGTCGGGTTGTTTGGGAATGCAGCCCAAAATGGGAGGTAAACTCC 12789 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 |||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||| Sbjct 12788 TTCTAAAGCTAAATATTGGCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGA 12729 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 ||||||||||| ||||| |||| || || |||||||| ||| |||||||||||| || Sbjct 12728 AAAGCACTTTGAAAAGAAAGTT-AATAGTACGTGAAACCGTTAAAAGGGAAGCGCATG 12672 >seq109 Length=334349 Score = 235 bits (260), Expect = 2e-59 Identities = 240/311 (77%), Gaps = 33/311 (11%) Strand=Plus/Plus Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC- 462 ||| || |||||| |||||||||||||||||||||||| | ||||||| || |||| | Sbjct 222103 GCGACCTGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTCTTCAGGTGACT 222162 Query 463 -AAACCCGTGCGCGTAATGAAAGTGAACG------------GAGGTGGGAAC---CCG-- 504 |||||| || || ||||||||| || | || ||| || | ||| Sbjct 222163 GAAACCCTTGGGCACAATGAAAGTAAAGGCTTGCAAAAGCTGAAGTGAGATCTTGCCGCA 222222 Query 505 ------TGAGG---GTGCACCATCGACCGATCCTGATGT---CTTCGGATGGATTTGAGT 552 || || | ||| ||| |||||| ||| | | ||| | | || ||||||| Sbjct 222223 CTCCAATGCGGTGAGCGCATCATTGACCGA-CCTATTCTACTCTTAGAAAGG-TTTGAGT 222280 Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 ||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 222281 AAGAGCACATCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGAGTAGGGTGAAGCCAG 222340 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 |||||||||||||||||||||| ||| ||||| |||||||||||||||||||| ||| | Sbjct 222341 AGGAAACTCTGGTGGAGGCTCGTAGCAATTCTGACGTGCAAATCGATCGTCAAACTTGAG 222400 Query 673 TATAGGGGCGA 683 ||||||||||| Sbjct 222401 TATAGGGGCGA 222411 >seq2200 Length=106026 Score = 215 bits (238), Expect = 2e-53 Identities = 237/312 (76%), Gaps = 35/312 (11%) Strand=Plus/Plus Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC- 462 ||| |||||||| |||||||||||||||||||||||| | ||||||| || ||||| | Sbjct 89343 GCGACCCGTCTTAAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTCTTCGGGTGACT 89402 Query 463 -AAACCCGTGCGCGTAATGAAAGTGAACG------------GAGGTGGGAAC---CCG-- 504 |||||| | || ||||||||| || | || ||| | | ||| Sbjct 89403 GAAACCCTCGGGCACAATGAAAGTAAAGGCTCGCAAGAGCTGAAGTGAAATCTTGCCGCA 89462 Query 505 ------TGAGG---GTGCACCATCGACCGATCCTGATG----TCTTCGGATGGATTTGAG 551 || || | ||| ||| |||| | ||| || |||| | | || |||||| Sbjct 89463 CTCCAATGCGGTGAGCGCATCATTGACCAA-CCT-ATACTACTCTTAGAAAGG-TTTGAG 89519 Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 |||||||| | ||||||||||||||| ||||||||||||||| ||| ||||||||||||| Sbjct 89520 TAAGAGCACATCTGTTGGGACCCGAATGATGGTGAACTATGCTTGAGTAGGGTGAAGCCA 89579 Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 |||||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| ||| Sbjct 89580 GAGGAAACTCTGATGGAGGCTCGTAGCGATTCTGACGTGCAAATTGATCGTCAAACTTGA 89639 Query 672 GTATAGGGGCGA 683 |||||||||||| Sbjct 89640 GTATAGGGGCGA 89651 >seq377 Length=235315 Score = 208 bits (230), Expect = 3e-51 Identities = 129/138 (93%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 546 TTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 |||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||| Sbjct 208496 TTTGAGTAAGAGCACATCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGAGTAGGGTG 208437 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct 208436 AAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAA 208377 Query 666 ATTTGGGTATAGGGGCGA 683 | ||| |||||||||||| Sbjct 208376 ACTTGAGTATAGGGGCGA 208359 >seq17268 Length=3537 Score = 201 bits (222), Expect = 5e-49 Identities = 152/178 (85%), Gaps = 1/178 (1%) Strand=Plus/Minus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 ||||| | ||| | |||||| |||||||||||||||||| | |||||||||||||| | | Sbjct 400 GAAGCGCTTTCTATGAGTCGGGTTGTTTGGGAATGCAGCCCAAAATGGGAGGTAAACTCC 341 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 ||| |||||||||||||||| ||||||||||||| ||||||| |||| ||||||||| Sbjct 340 TTCAAAAGCTAAATATTGGCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGA 281 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 ||||||||||| ||||| |||| || || |||||||| ||| |||||||||||| || Sbjct 280 AAAGCACTTTGAAAAGAAAGTT-AATAGTACGTGAAACCGTTAAAAGGGAAGCGCATG 224 >seq16931 Length=3740 Score = 201 bits (222), Expect = 5e-49 Identities = 152/178 (85%), Gaps = 1/178 (1%) Strand=Plus/Minus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 ||||| | || | |||||| |||||||||||||||||| | |||||||||||||| | | Sbjct 2880 GAAGCGCTTTTTATGAGTCGGGTTGTTTGGGAATGCAGCCCAAAATGGGAGGTAAACTCC 2821 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 |||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||| Sbjct 2820 TTCTAAAGCTAAATATTGGCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGA 2761 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 ||||||||||| ||||| |||| || || |||||||| ||| |||||||||||| || Sbjct 2760 AAAGCACTTTGAAAAGAAAGTT-AATAGTACGTGAAACCGTTAAAAGGGAAGCGCATG 2704 >seq3209 Length=80328 Score = 199 bits (220), Expect = 2e-48 Identities = 231/309 (75%), Gaps = 33/309 (11%) Strand=Plus/Plus Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC- 462 ||| ||||| ||| |||||||||||||||||||||||| | ||||||| || |||| | Sbjct 65964 GCGACCCGTTTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTCTTCAGGTGACT 66023 Query 463 -AAACCCGTGCGCGTAATGAAAGTGAACG------------GAGGTGGGAAC---CCG-- 504 |||||| | | ||| ||||| || | || ||| || | ||| Sbjct 66024 GAAACCCTCGGACACAATAAAAGTAAAGGCTCGCGAGAGCTGAAGTGAGATCTTGCCGCA 66083 Query 505 ------TGAGG---GTGCACCATCGACCGATCCTGATGT---CTTCGGATGGATTTGAGT 552 || || | ||| ||| |||||| ||| | | ||| | | || ||||||| Sbjct 66084 CTCCAATGCGGTAAGCGCATCATTGACCGA-CCTATTCTACTCTTAGAAAGG-TTTGAGT 66141 Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 ||||||| | ||||||||||||||||||||||||||||||| ||| |||||| ||||||| Sbjct 66142 AAGAGCACATCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGAGTAGGGTAAAGCCAG 66201 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 ||||||||||||||||||||| ||| ||||| || |||||| |||||||||| ||| | Sbjct 66202 AGGAAACTCTGGTGGAGGCTCATAGCAATTCTGACGAGCAAATTGATCGTCAAACTTGAG 66261 Query 673 TATAGGGGC 681 ||||||||| Sbjct 66262 TATAGGGGC 66270 >seq17257 Length=3542 Score = 194 bits (214), Expect = 7e-47 Identities = 152/178 (85%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 ||||| | ||| | |||||| ||||||||||| |||||| | |||||||||||||| | | Sbjct 1080 GAAGCGCTTTCTATGAGTCGGGTTGTTTGGGA-TGCAGCCC-AAATGGGAGGTAAACTCC 1137 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 |||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||| Sbjct 1138 TTCTAAAGCTAAATATTGGCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGA 1197 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 ||||||||||| ||||| |||| || || |||||||| ||| |||||||||||| || Sbjct 1198 AAAGCACTTTGAAAAGAAAGTT-AATAGTACGTGAAACCGTTAAAAGGGAAGCGCATG 1254 Score = 82.4 bits (90), Expect = 3e-13 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG--T 461 ||| ||||||||| |||||||||||||||||||||||| | ||||||| | ||||| | Sbjct 1656 GCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTCGTCGGGTGACT 1715 Query 462 CAAACCCGTGCGCGTAATGAAAGTGAA 488 |||||| | || ||||||||| || Sbjct 1716 GAAACCCTCGGGCACAATGAAAGTAAA 1742 >seq543 Length=204803 Score = 165 bits (182), Expect = 3e-38 Identities = 108/119 (91%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| |||| |||||||||||||||||| | | |||||||||||||||||||||||||| Sbjct 89004 GTTGGAACCCAAAAGATGGTGAACTATGCTTAAGTAGGGTGAAGCCAGAGGAAACTCTGG 89063 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| |||| ||||| ||||||||||||||| |||| ||| |||||||||||| Sbjct 89064 TGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGCCAAACTTGAGTATAGGGGCGA 89122 >seq10605 Length=17098 Score = 149 bits (164), Expect = 3e-33 Identities = 98/107 (92%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 578 AGATGGTG-AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCA 636 |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| | Sbjct 9991 AGATGGTGCAACTATGCTTGAGTAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTA 9932 Query 637 GCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||| |||||||||||||||||||| || |||||||||||| Sbjct 9931 GCGATTCTGACGTGCAAATCGATCGTCAAACTTAAGTATAGGGGCGA 9885 Score = 80.6 bits (88), Expect = 1e-12 Identities = 67/81 (83%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 410 CGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG--TCAAACC 467 ||||||| |||||||||||||||||||||||| | ||||||| || ||||| | ||||| Sbjct 10229 CGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTCTTCGGGTGACTGAAACC 10170 Query 468 CGTGCGCGTAATGAAAGTGAA 488 | | || ||||||||| || Sbjct 10169 CTCGGGCACAATGAAAGTAAA 10149 >seq5008 Length=54053 Score = 120 bits (132), Expect = 1e-24 Identities = 104/128 (81%), Gaps = 7/128 (5%) Strand=Plus/Plus Query 558 CATAG--CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 ||||| ||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct 48144 CATAGATCTGTTGGGACCAAAAAGATGGTGAACTATGTTTG-----GGTGAAGCCAGAGG 48198 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 |||||||| |||||||| | | | |||| |||||||||||| |||||| ||| |||| Sbjct 48199 AAACTCTGCTGGAGGCTTGTACCAATTCTAATGTGCAAATCGATTGTCAAACTTGAGTAT 48258 Query 676 AGGGGCGA 683 ||||| || Sbjct 48259 AGGGGTGA 48266 >seq1388 Length=137882 Score = 78.8 bits (86), Expect = 4e-12 Identities = 84/111 (76%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAA 97 |||||||| ||| |||| |||||| | | |||| ||| ||||| ||||| ||||||| Sbjct 125882 ACGAGTCGGGTTTTTTGAGAATGCTGTCCAAAATAAAAGGCAAATTCCTTCTTAAGCTAA 125941 Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 |||||| |||| |||||| ||||||| | || ||||||| |||| Sbjct 125942 ATATTGCTACCAGACTGATAGCAAACAAGTATCGCGAGGGAAAGATAAAAA 125992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079551351800