Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10669 295 1e-77 seq939 295 1e-77 seq8438 205 1e-50 seq77 179 6e-43 seq142 163 5e-38 seq2478 158 2e-36 seq7019 134 2e-29 seq4636 125 1e-26 seq7310 120 5e-25 seq475 102 1e-19 seq9592 95.1 2e-17 >seq10669 Length=16854 Score = 295 bits (326), Expect = 1e-77 Identities = 220/257 (86%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3332 ACTCGCTGCATTCGACAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3391 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||| || | |||| | | |||| ||||||||||||||| ||| | Sbjct 3392 CCTGTTATTGCCTTC--CTGACTTTGGTTAAACACCAACAGTCCCTCTAAGAAGTCAGTC 3449 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || | | || | ||||||||| |||||||||||||||||||| ||||||||| Sbjct 3450 ACGGTTCGGGAACCGTGTGACTATTTAGCCGGTTAAGGTCTCGTTCGTTAACGGAATTAA 3509 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3510 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 3569 Query 242 AGAGCTATCAATCTGTC 258 || |||||||| ||||| Sbjct 3570 AGGGCTATCAACCTGTC 3586 Score = 259 bits (286), Expect = 8e-67 Identities = 207/245 (84%), Gaps = 7/245 (3%) Strand=Plus/Plus Query 14 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 || ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||| Sbjct 13365 CGACAGTGTAGCGCGCGTGCGGCCCAGA-CATCTAAGGGCATCACAGAC-TGTA--TGCT 13420 Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGT 133 || || | |||| | | |||| ||||||||||||||| ||| ||| | Sbjct 13421 TC---CTGACTTTGGTTAAACACCAACAGTCCCTCTAAGAAGTCAGTCACGGTTCGGGAA 13477 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | || | ||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 13478 CCGTGTGACTATTTAGCCGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 13537 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 13538 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGGGCTATCAAC 13597 Query 254 CTGTC 258 ||||| Sbjct 13598 CTGTC 13602 >seq939 Length=165061 Score = 295 bits (326), Expect = 1e-77 Identities = 220/257 (86%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 150686 ACTCGCTGCATTCGACAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 150627 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||| || | |||| | | |||| ||||||||||||||| ||| | Sbjct 150626 CCTGTTATTGCCTTC--CTGACTTTGGTTAAACACCAACAGTCCCTCTAAGAAGTCAGTC 150569 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || | | || | ||||||||| |||||||||||||||||||| ||||||||| Sbjct 150568 ACGGTTCGGGAACCGTGTGACTATTTAGCCGGTTAAGGTCTCGTTCGTTAACGGAATTAA 150509 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 150508 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 150449 Query 242 AGAGCTATCAATCTGTC 258 || |||||||| ||||| Sbjct 150448 AGGGCTATCAACCTGTC 150432 Score = 109 bits (120), Expect = 9e-22 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 144060 ACTCGCTGCATTCGACAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 144119 Query 62 CCTGTTATTGCCT 74 ||||||||||||| Sbjct 144120 CCTGTTATTGCCT 144132 >seq8438 Length=26807 Score = 205 bits (226), Expect = 1e-50 Identities = 208/272 (76%), Gaps = 18/272 (7%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | || ||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 3994 ACTCGCTGCATTCGACAGTGTAGCGCGCGTGCGGCCCAGA-CATCTAAGGACATCACAGA 4052 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||| || | |||| | | | || ||| || ||||||| ||| | Sbjct 4053 CCTGTTATTGCCTTT--CTGACTTTGGTTAAACACTAACAGTTTCTTTAAGAAGTCAGTC 4110 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTT---------------AAGGTCTCGTT 166 || | | || | ||||||| | ||| ||||||||||| Sbjct 4111 ACGGTTCGGGAACCGTGTGACTATTTAACCGGTCTCGTTTGTTTTCGTAAAGGTCTCGTT 4170 Query 167 CGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAC 226 |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 4171 TGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAATGGCCATGCACCACCAC 4230 Query 227 CCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||| ||||||||||| |||||||| ||||| Sbjct 4231 ACATAAAATCAAGAAAGGGCTATCAACCTGTC 4262 >seq77 Length=363809 Score = 179 bits (198), Expect = 6e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 126920 CTATTTAGCCGGTTAAGGTCTCGTTCGTTAACGGAATTACCCAGACAAATCACTCCACCA 126861 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 126860 ACTAAGAACAACCATGCACCACCACCCATAGAATCAAGAAAGGGCTATCAACCTGTC 126804 >seq142 Length=314173 Score = 163 bits (180), Expect = 5e-38 Identities = 134/163 (82%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 96 CCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTT 155 |||| ||||||||||||||| ||| ||| | | | ||| | ||||||||| |||| Sbjct 147665 CCAACAGTCCCTCTAAGAAGTCAGTCACGGTTCGGAAACCATGTGACTATTTAGCCGGTT 147606 Query 156 AAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCA 215 | |||||||||||| ||||||||| |||||||||||||| ||||||||||| || ||| Sbjct 147605 TAAGTCTCGTTCGTTTACGGAATTAAACAGACAAATCACTCTACCAACTAAGAGCGACCA 147546 Query 216 TGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| |||||||||| ||||||| ||||| Sbjct 147545 TGCACCACCACCCATTAAATCAAGAAAAGTCTATCAACCTGTC 147503 >seq2478 Length=98033 Score = 158 bits (174), Expect = 2e-36 Identities = 142/175 (81%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 67528 ACTCGCTGCATTCGACAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 67469 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||| || | |||| | | |||| ||||||||||||||| ||| | Sbjct 67468 CCTGTTATTGCCT--TCCTGACTTTGGTTAAACACCAACAGTCCCTCTAAGAAGTCAGTC 67411 Query 122 AC-CAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 || | | | || || | ||||||||| |||||||||||||||||||| ||| Sbjct 67410 ACGGTTCGAGAACCG-TGTGACTATTTAGCCGGTTAAGGTCTCGTTCGTTAACGG 67357 >seq7019 Length=36114 Score = 134 bits (148), Expect = 2e-29 Identities = 91/102 (89%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 155 TAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCC 214 |||||||| |||||||| | |||||||||||||||||||||| ||||||| | |||| || Sbjct 9474 TAAGGTCTTGTTCGTTAACAGAATTAACCAGACAAATCACTCTACCAACTGAAAACGTCC 9533 Query 215 ATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 | ||||||||||||||| ||||||||||| |||||||| ||| Sbjct 9534 ACGCACCACCACCCATAAAATCAAGAAAGGGCTATCAACCTG 9575 >seq4636 Length=58326 Score = 125 bits (138), Expect = 1e-26 Identities = 75/79 (95%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 31240 AATCAGACAAATCACTCCACCAACTAAGAACGGCCATGAACCACCACCCATAGAATCAAG 31299 Query 240 AAAGAGCTATCAATCTGTC 258 |||| |||||||| ||||| Sbjct 31300 AAAGGGCTATCAACCTGTC 31318 >seq7310 Length=34049 Score = 120 bits (132), Expect = 5e-25 Identities = 74/79 (94%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 20923 AATCAGACAAATCACTCCACCAACTTAGAACGGCCATGAACCACCACCCATAGAATCAAG 20982 Query 240 AAAGAGCTATCAATCTGTC 258 |||| |||||||| ||||| Sbjct 20983 AAAGGGCTATCAACCTGTC 21001 >seq475 Length=217259 Score = 102 bits (112), Expect = 1e-19 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct 78286 CTATTTAGTCGGTTAAGGTCTCGTTCGTTAACGGAATTAACTAGACAAATCACTCCACTT 78227 Query 202 ACTAAGAACGG 212 ||||||||||| Sbjct 78226 ACTAAGAACGG 78216 >seq9592 Length=21221 Score = 95.1 bits (104), Expect = 2e-17 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | || ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2277 ACTCGCTGCATTCGACAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCGTCACAGA 2218 Query 62 CCTGTTA 68 ||||||| Sbjct 2217 CCTGTTA 2211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796638549396