Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq102 102 5e-20 seq10669 98.7 6e-19 seq9592 98.7 6e-19 seq939 98.7 6e-19 seq2478 93.3 3e-17 seq8438 78.8 6e-13 >seq102 Length=339552 Score = 102 bits (112), Expect = 5e-20 Identities = 78/87 (90%), Gaps = 4/87 (5%) Strand=Plus/Plus Query 38 TTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAA 97 ||||||| | ||||||||| ||||| || ||||||||| ||||||||||| ||||||||| Sbjct 118958 TTCCGAA-GATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAA 119014 Query 98 GGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||| |||||| |||| Sbjct 119015 GGGCAGGGACGTAAT-CAACGCGAGCT 119040 >seq10669 Length=16854 Score = 98.7 bits (108), Expect = 6e-19 Identities = 72/80 (90%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 3144 AGATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 3201 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| |||||| |||| Sbjct 3202 GACGTAAT-CAACGCGAGCT 3220 >seq9592 Length=21221 Score = 98.7 bits (108), Expect = 6e-19 Identities = 80/92 (87%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 33 GCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGT 92 |||||| | || | ||||||||| ||||| || ||||||||| ||||||||||| |||| Sbjct 2475 GCCAATCCGGAGA--TCTCACTAATCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGT 2420 Query 93 ACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||||| |||||| |||| Sbjct 2419 ACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 2389 >seq939 Length=165061 Score = 98.7 bits (108), Expect = 6e-19 Identities = 72/80 (90%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 143872 AGATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 143929 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| |||||| |||| Sbjct 143930 GACGTAAT-CAACGCGAGCT 143948 Score = 98.7 bits (108), Expect = 6e-19 Identities = 72/80 (90%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 150874 AGATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 150817 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| |||||| |||| Sbjct 150816 GACGTAAT-CAACGCGAGCT 150798 >seq2478 Length=98033 Score = 93.3 bits (102), Expect = 3e-17 Identities = 71/80 (89%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 67716 AGATCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGG 67659 Query 105 GACGTAATACAACGCAAGCT 124 |||||||| ||||| |||| Sbjct 67658 GACGTAAT-TAACGCGAGCT 67640 >seq8438 Length=26807 Score = 78.8 bits (86), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| |||||| || |||||||| |||||||||| |||||||||| |||| ||| Sbjct 3809 TCTCACTAAACCATTTAAT-CGGTAGTA-GCGACGGGCGCTGTGTACAAAGAGCAGAGAC 3866 Query 108 GTAATACAACGCAAGCT 124 ||||| || ||| |||| Sbjct 3867 GTAAT-CATCGCGAGCT 3882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300741016880