Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10669 264 2e-68 seq939 264 2e-68 seq2478 259 9e-67 seq9592 237 3e-60 seq8438 196 9e-48 seq1819 123 5e-26 seq102 96.9 7e-18 >seq10669 Length=16854 Score = 264 bits (292), Expect = 2e-68 Identities = 249/312 (80%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTT--GGCGGGTCGCCGGCTTCTT 77 || ||||||||||||| ||||||||| || | || || | || | | |||||| Sbjct 3495 GAACGAGACCTTAACCGGCTAAATAGTCA--CACGGTTCCCGAACCGTGACTGACTTCTT 3438 Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||||| | || | | || | | || ||||||||||||||||||||||||| Sbjct 3437 AGAGGGACTGTTGGTGTTTAACCAAAGTCAGGA--AGGCAATAACAGGTCTGTGATGCCC 3380 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||||||||||||||||||||||||||||||||| | | || ||||| | | |||| Sbjct 3379 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGTCGAATGCAGCGAGT-CTTATCCTTAA 3321 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||||| |||||||||| | ||| | | |||| ||||||| || ||||||||||| Sbjct 3320 CCGAAAGGTTCGGGTAATCTTATGAAAGTTCGACGTGATGGGGATTGATCATTGCAATTA 3261 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 ||| || | |||||||||| ||||||||||||| ||||||||| |||||||||||||||| Sbjct 3260 TTGATCATGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCC 3201 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 3200 CTGCCCTTTGTA 3189 Score = 86.0 bits (94), Expect = 1e-14 Identities = 125/168 (74%), Gaps = 13/168 (8%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTT--GGCGGGTCGCCGGCTTCTT 77 || ||||||||||||| ||||||||| || | || || | || | | |||||| Sbjct 13511 GAACGAGACCTTAACCGGCTAAATAGTCA--CACGGTTCCCGAACCGTGACTGACTTCTT 13454 Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||||| | || | | || | | || || ||| |||| |||||||||||| Sbjct 13453 AGAGGGACTGTTGGTGTTTAACCAAAGTCAG---GAAGCAT--ACAG-TCTGTGATGCCC 13400 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||| |||||||||||||||||||||||| | || || ||||| Sbjct 13399 TTAGATGT-CTGGGCCGCACGCGCGCTACACTGTC-GATGCAGCGAGT 13354 >seq939 Length=165061 Score = 264 bits (292), Expect = 2e-68 Identities = 249/312 (80%), Gaps = 8/312 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTT--GGCGGGTCGCCGGCTTCTT 77 || ||||||||||||| ||||||||| || | || || | || | | |||||| Sbjct 150523 GAACGAGACCTTAACCGGCTAAATAGTCA--CACGGTTCCCGAACCGTGACTGACTTCTT 150580 Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||||| | || | | || | | || ||||||||||||||||||||||||| Sbjct 150581 AGAGGGACTGTTGGTGTTTAACCAAAGTCAGGA--AGGCAATAACAGGTCTGTGATGCCC 150638 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||||||||||||||||||||||||||||||||| | | || ||||| | | |||| Sbjct 150639 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGTCGAATGCAGCGAGT-CTTATCCTTAA 150697 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||||| |||||||||| | ||| | | |||| ||||||| || ||||||||||| Sbjct 150698 CCGAAAGGTTCGGGTAATCTTATGAAAGTTCGACGTGATGGGGATTGATCATTGCAATTA 150757 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 ||| || | |||||||||| ||||||||||||| ||||||||| |||||||||||||||| Sbjct 150758 TTGATCATGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCC 150817 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 150818 CTGCCCTTTGTA 150829 Score = 253 bits (280), Expect = 4e-65 Identities = 187/217 (86%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 112 AGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 144132 AGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGTC 144073 Query 172 AGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231 | || ||||| | | |||| ||| ||||| |||||||||| | ||| | | || Sbjct 144072 GAATGCAGCGAGT-CTTATCCTTAACCGAAAGGTTCGGGTAATCTTATGAAAGTTCGACG 144014 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 || ||||||| || |||||||||||||| || | |||||||||| ||||||||||||| | Sbjct 144013 TGATGGGGATTGATCATTGCAATTATTGATCATGAACGAGGAATTCCTAGTAAGCGCGAG 143954 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||| |||||||||||||||||||||||||||| Sbjct 143953 TCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 143917 >seq2478 Length=98033 Score = 259 bits (286), Expect = 9e-67 Identities = 248/312 (79%), Gaps = 8/312 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTT--GGCGGGTCGCCGGCTTCTT 77 || ||||||||||||| ||||||||| || | || || | || | | |||||| Sbjct 67365 GAACGAGACCTTAACCGGCTAAATAGTCA--CACGGTTCTCGAACCGTGACTGACTTCTT 67422 Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 ||||||||| | || | | || | | || ||||||||||||||||||||||||| Sbjct 67423 AGAGGGACTGTTGGTGTTTAACCAAAGTCAGGA--AGGCAATAACAGGTCTGTGATGCCC 67480 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||||||||||||||||||||||||||||||||| | | || ||||| | | |||| Sbjct 67481 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGTCGAATGCAGCGAGT-CTTATCCTTAA 67539 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||||| |||||||||| | ||| | | |||| ||||||| || ||||||||||| Sbjct 67540 CCGAAAGGTTCGGGTAATCTTATGAAAGTTCGACGTGATGGGGATTGATCATTGCAATTA 67599 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 ||| || | |||||||||| ||||||||||||| ||||||||| |||||| ||||||||| Sbjct 67600 TTGATCATGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTAATTACGTCC 67659 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 67660 CTGCCCTTTGTA 67671 >seq9592 Length=21221 Score = 237 bits (262), Expect = 3e-60 Identities = 180/211 (85%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 118 TAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCC 177 |||||||||||||| ||||||||||||||||||||||||||||||||||||| | | | Sbjct 2211 TAACAGGTCTGTGACGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGTCGAATGC 2270 Query 178 AACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGG 237 | ||||| | | |||| ||| ||||| |||||||||| | ||| | | |||| ||| Sbjct 2271 AGCGAGT-CTTATCCTTAACCGAAAGGTTCGGGTAATCTTATGAAAGTTCGACGTGATGG 2329 Query 238 GGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCA 297 |||| || |||||||||||||| || | |||||||||| ||||||||||||| ||||||| Sbjct 2330 GGATTGATCATTGCAATTATTGATCATGAACGAGGAATTCCTAGTAAGCGCGAGTCATCA 2389 Query 298 GCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || |||||||||||||||||||||||||||| Sbjct 2390 GCTCGCGTTGATTACGTCCCTGCCCTTTGTA 2420 >seq8438 Length=26807 Score = 196 bits (216), Expect = 9e-48 Identities = 175/217 (81%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 112 AGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | Sbjct 4065 AGGCAATAACAGGTCTGTGATGTCCTTAGATGT-CTGGGCCGCACGCGCGCTACACTGTC 4007 Query 172 AGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231 | || ||||| | | |||| | | || || |||||||||| | ||| | | || Sbjct 4006 GAATGCAGCGAGT-CTTATCCTTAACAGAAAAGTTCGGGTAATCTTATGAAAGTTCGACG 3948 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 || ||||||| || ||||||||||||| | | |||||||||| ||||||| |||| | Sbjct 3947 TGATGGGGATCGATTATTGCAATTATTGATAATGAACGAGGAATTCCTAGTACACGCGAG 3888 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||| |||| |||||||||| |||| ||||||| Sbjct 3887 TCATAAGCTCGCGATGATTACGTCTCTGCTCTTTGTA 3851 >seq1819 Length=118955 Score = 123 bits (136), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 209 GGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAAC 268 |||||||| | ||| | | |||| ||| ||| || |||||||||||||| || | ||| Sbjct 56915 GGTAATCTA-TAAAAGTTCGACGTGATGGCGATTGATCATTGCAATTATTGATCATGAAC 56973 Query 269 GAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||||||| ||| ||||||||| || |||||||||||||||||||||||| Sbjct 56974 GAGGAATTCCTAGTAAGTGCGAGTCATCAGCTTGCATTGATTACGTCCCTGCCCTTTGTA 57033 >seq102 Length=339552 Score = 96.9 bits (106), Expect = 7e-18 Identities = 59/63 (94%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 266 AACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325 |||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 119071 AACGAGGAATTCCTAGCAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTT 119012 Query 326 GTA 328 ||| Sbjct 119011 GTA 119009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947001883648