Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq10669 125 1e-26 seq2200 125 1e-26 seq19904 120 5e-25 seq109 120 5e-25 seq667 116 6e-24 seq3209 111 3e-22 seq615 107 3e-21 seq7906 100 5e-19 seq3650 86.0 1e-14 seq1893 84.2 4e-14 seq1749 82.4 1e-13 seq543 78.8 2e-12 >seq10669 Length=16854 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||| ||||| || ||| ||||| | Sbjct 9291 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGCATTTGCACTTGCTTGAAAAGGCAAT 9234 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| | Sbjct 9233 GGTGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGTGCTA 9174 Query 121 GAA 123 ||| Sbjct 9173 GAA 9171 >seq2200 Length=106026 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||| ||||| || ||| ||||| | Sbjct 91797 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGCATTTGCACTTGCTTGAAAAGGCAAT 91854 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| | Sbjct 91855 GGTGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGTGCTA 91914 Query 121 GAA 123 ||| Sbjct 91915 GAA 91917 >seq19904 Length=2182 Score = 120 bits (132), Expect = 5e-25 Identities = 102/123 (83%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||| ||||| || ||| ||||| | Sbjct 1597 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGCATTTGCACTTGCTTGAAAAGGCAAT 1654 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| ||||||||| |||||||||||||||||||||||| || | Sbjct 1655 GGTGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGTGTTA 1714 Query 121 GAA 123 ||| Sbjct 1715 GAA 1717 >seq109 Length=334349 Score = 120 bits (132), Expect = 5e-25 Identities = 102/123 (83%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||| ||||| || ||| ||||| | Sbjct 224507 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGCATTTGCACTTGCTTGAAAAGGCAAT 224564 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| ||||||||| |||||||||||||||||||||||| || | Sbjct 224565 GGTGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGTGTTA 224624 Query 121 GAA 123 ||| Sbjct 224625 GAA 224627 >seq667 Length=191124 Score = 116 bits (128), Expect = 6e-24 Identities = 101/123 (82%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||| | ||||| || ||| ||||| | Sbjct 138569 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTTGCATTTGCACTTGCTTGAAAAGGCAAT 138626 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| ||||||||| |||||||||||||||||| ||||| ||| | Sbjct 138627 GGTGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAAAATCCGTGCTA 138686 Query 121 GAA 123 ||| Sbjct 138687 GAA 138689 >seq3209 Length=80328 Score = 111 bits (122), Expect = 3e-22 Identities = 100/123 (81%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||| ||||| || ||| ||||| Sbjct 68413 GTACGAGAGGAACCGCAGA-TTCAGAC-AATTGGCATTTGCACTTGCTTGAAAAGGCATC 68470 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 || |||||||||||||| ||||||||| ||||| |||||||||||||||||| ||| | Sbjct 68471 AGCGTGAAGCTACCATCTGTTGGATTATGACTGAATGCCTCTAAGTCAGAATCCGTGCTA 68530 Query 121 GAA 123 ||| Sbjct 68531 GAA 68533 >seq615 Length=197459 Score = 107 bits (118), Expect = 3e-21 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| ||||||||||| || |||||| |||||| ||||| || || ||||| | Sbjct 24139 GTACAAGAGGAACCGCAGA-TTCAGAC-AATTGGCATTTGCACTTGCTTGGAAAGGCAAT 24196 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||||||||| ||||||||| || |||||||||||||||||| |||||| | Sbjct 24197 GGTACGAAGCTACCATCTGTTGGATTATGACTAAACGCCTCTAAGTCAGAACCCATGCTA 24256 Query 121 GAA 123 ||| Sbjct 24257 GAA 24259 >seq7906 Length=30216 Score = 100 bits (110), Expect = 5e-19 Identities = 88/107 (82%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| |||||| ||||| || ||| ||||| | Sbjct 18254 GTACGAGAGGAACCGTAGA-TTCAGAC-AATTGGCATTTGCACTTGCTTGAAAAGGCAAT 18311 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC 107 | |||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 18312 GGTGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTC 18358 >seq3650 Length=72766 Score = 86.0 bits (94), Expect = 1e-14 Identities = 84/106 (79%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||| | |||||| || |||||| |||||| ||||| || ||| ||||| | Sbjct 8371 GTACGAGTGTAACCGCAGA-TTCAGAC-AATTGGCATTTGCACTTGCTTGAAAAGGCAAT 8428 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGT 106 | || || |||||||||| ||||||||| |||||||||||||||| Sbjct 8429 GGTGCAAAACTACCATCTGTTGGATTATGACTGAACGCCTCTAAGT 8474 >seq1893 Length=116257 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| || |||||| ||| | || || || ||| || | | Sbjct 35520 GTACGAGAGGAACCCTAGA-TTCAGACAAATAGCATTA-GCACTTGCTTGAAAAGCTAAT 35463 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | ||| |||||||||| ||||||||| |||||||||||||||| ||||||||||| | Sbjct 35462 GGTGTGAAACTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTTAGAATCCATGCTA 35403 Query 121 GAA 123 ||| Sbjct 35402 GAA 35400 >seq1749 Length=121769 Score = 82.4 bits (90), Expect = 1e-13 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||||||||||||| || ||||||||| ||||| ||||||||||||||||||||| |||| Sbjct 28041 GCGAAGCTACCATTTGTTGGATTATGACTGAAGGCCTCTAAGTCAGAATCCATGTTAGAA 28100 >seq543 Length=204803 Score = 78.8 bits (86), Expect = 2e-12 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| | |||| ||||| || || ||||| Sbjct 90280 GTACGAGAGGAACCGCAGA-TTCAGAC-AGTTGGCATTTGCACTTGCTCGAAAAGGCATC 90337 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGA 110 |||||||||||||||| ||||||||| ||||| |||||||||||| Sbjct 90338 AGTGCGAAGCTACCATCTGTTGGATTATGACTGAATCTCTCTAAGTCAGA 90387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819034010624