Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq17268 654 0.0 seq10669 654 0.0 seq109 627 3e-177 seq8230 376 8e-102 seq2448 304 4e-80 seq9416 273 7e-71 seq332 111 5e-22 seq4873 100 9e-19 seq5739 93.3 1e-16 >seq17268 Length=3537 Score = 654 bits (724), Expect = 0.0 Identities = 454/511 (89%), Gaps = 8/511 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||| ||| | ||||| | || |||| ||| | ||||| |||||||||||| Sbjct 2778 GTTCTCATTCCGATTGCGAGACCTATAAAGGCCCCGTACCGTTATTTCTTGTCACTACCT 2837 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||| Sbjct 2838 CCCCGAATCGGGATTGGGTAATTTTCGTGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTT 2897 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct 2898 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTGCAACCATGGTA 2957 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 2958 AGCCACTACCTTACCATCGACAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCG 3017 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG---GAGCCCCGAAG--GGCG 295 ||||||||||||||||| ||||||| ||||||||||||| | | |||| | || Sbjct 3018 CAAGGCCATGCGATTCGAAAAGTTATCATGAATCACCAAGCAAGCGGACCGAGGCCCGCA 3077 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAGCATGTATTA 353 ||||||||| ||||||||||||| ||||||| ||||||||| | ||| |||||||||| Sbjct 3078 TTGGTTTTTAGTCTAATAAATACATCCCTTCCGTGAAGTCGGGATCTTTCGCATGTATTA 3137 Query 354 GCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGAT 413 |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||| Sbjct 3138 GCTCTAGAATTACCACAGGTATCCATGTAGTAAGGTACAATCAAATAAACGATAACTGAT 3197 Query 414 TTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTA 473 |||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||||| Sbjct 3198 TTAATGAGCCATTCGCAGTTTCACAGTACA-AGTGCTTATACTTAGACATGCATGGCTTA 3256 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| Sbjct 3257 ATCTTTGAGACAAGCATATGACTACTGGCAG 3287 >seq10669 Length=16854 Score = 654 bits (724), Expect = 0.0 Identities = 454/511 (89%), Gaps = 8/511 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||| ||| | ||||| | || |||| ||| | ||||| |||||||||||| Sbjct 4299 GTTCTCATTCCGATTGCGAGACCTATAAAGGCCCCGTACCGTTATTTCTTGTCACTACCT 4358 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||| Sbjct 4359 CCCCGAATCGGGATTGGGTAATTTTCGTGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTT 4418 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct 4419 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTGCAACCATGGTA 4478 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 4479 AGCCACTACCTTACCATCGACAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCG 4538 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG---GAGCCCCGAAG--GGCG 295 ||||||||||||||||| ||||||| ||||||||||||| | | |||| | || Sbjct 4539 CAAGGCCATGCGATTCGAAAAGTTATCATGAATCACCAAGCAAGCGGACCGAGGCCCGCA 4598 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAGCATGTATTA 353 ||||||||| ||||||||||||| ||||||| ||||||||| | ||| |||||||||| Sbjct 4599 TTGGTTTTTAGTCTAATAAATACATCCCTTCCGTGAAGTCGGGATCTTTCGCATGTATTA 4658 Query 354 GCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGAT 413 |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||| Sbjct 4659 GCTCTAGAATTACCACAGGTATCCATGTAGTAAGGTACAATCAAATAAACGATAACTGAT 4718 Query 414 TTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTA 473 |||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||||| Sbjct 4719 TTAATGAGCCATTCGCAGTTTCACAGTACA-AGTGCTTATACTTAGACATGCATGGCTTA 4777 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| Sbjct 4778 ATCTTTGAGACAAGCATATGACTACTGGCAG 4808 Score = 479 bits (530), Expect = 9e-133 Identities = 346/389 (89%), Gaps = 13/389 (3%) Strand=Plus/Plus Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||| ||||| |||| ||||||| | |||| |||||||| ||||||||| | Sbjct 15672 TCAGGCTCCCTC-CCGGA-TCGA-CCCTAAT-CTCCGTCACCCGTTGCAACCATGGTAAG 15727 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242 |||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||| || Sbjct 15728 CCACTA-CTTACCATCGACAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCGCA 15786 Query 243 AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC---CCGAAGGGCG--TT 297 ||||||||||||||| ||||||| ||||||||||||| | | |||| | || || Sbjct 15787 AGGCCATGCGATTCGAAAAGTTATCATGAATCACCAAGCAAGCGGACCGAGGCCCGCATT 15846 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTATTAGC 355 ||||||| ||||||||||||| |||||||| |||||||| | ||| |||||||||||| Sbjct 15847 GGTTTTTAGTCTAATAAATACATCCCTTCCGTGAAGTCGGGATCTTTCGCATGTATTAGC 15906 Query 356 TCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTT 415 |||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 15907 TCTAGAATTACCACAGGTATCCATGTAGTAAGGTACAATCAAATAAACGATAACTGATTT 15966 Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475 |||||||||||||||||||||| ||| | | ||||||||||||||||||||||||||||| Sbjct 15967 AATGAGCCATTCGCAGTTTCACAGTACA-AGTGCTTATACTTAGACATGCATGGCTTAAT 16025 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| Sbjct 16026 CTTTGAGACAAGCATATGACTACTGGCAG 16054 Score = 183 bits (202), Expect = 9e-44 Identities = 128/146 (88%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||| ||| | ||||| | || |||| ||| | ||||| |||||||||||| Sbjct 14315 GTTCTCATTCCGATTGCGAGACCTATAAAGGCCCCGTACCGTTATTTCTTGTCACTACCT 14374 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||| Sbjct 14375 CCCCGAATCGGGATTGGGTAATTTTCGTGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTT 14434 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAA 146 |||||||||||||||||||||||||| Sbjct 14435 TCTCAGGCTCCCTCTCCGGAATCGAA 14460 >seq109 Length=334349 Score = 627 bits (694), Expect = 3e-177 Identities = 448/511 (88%), Gaps = 8/511 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||| ||| | ||||| | || |||| ||| | ||||| |||||||||||| Sbjct 219059 GTTCTCATTCCGATTGCGAGACCTATAAAGGCCCCGTACCTTTATTTCTTGTCACTACCT 219000 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||| Sbjct 218999 CCCCAAATCGGGATTGGGTAATTTTCGTGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTT 218940 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||| ||||||||||||| |||| |||| ||| ||||||||| Sbjct 218939 TCTCAGGCTCCCTCTCCGGAAACGAACCCTAATTCTCCGTCACCCTTTGCAACCATGGTA 218880 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| || Sbjct 218879 AGCCACTATTTTACCATCGACAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCAGCG 218820 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG---GAGCCCCGAAG--GGCG 295 ||||||||||||||||| ||||||| ||||||||||||| | | |||| | || Sbjct 218819 CAAGGCCATGCGATTCGAAAAGTTATCATGAATCACCAAGCAAGCGGACCGAGGCCCGCA 218760 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAGCATGTATTA 353 ||||||||| ||||||||||||| ||||||| ||||||||| | ||| |||||||||| Sbjct 218759 TTGGTTTTTAGTCTAATAAATACATCCCTTCCGTGAAGTCGGGATCTTTTGCATGTATTA 218700 Query 354 GCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGAT 413 |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||| Sbjct 218699 GCTCTAGAATTACCACAGGTATCCATGTAGTAAGGTACAATCAAATAAACGATAACTGAT 218640 Query 414 TTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTA 473 |||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||||| Sbjct 218639 TTAATGAGCCATTCGCAGTTTCACAGTACA-AGTGCTTATACTTAGACATGCATGGCTTA 218581 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||| ||||||||||||||||| Sbjct 218580 ATCTTTGAGACATACATATGACTACTGGCAG 218550 >seq8230 Length=28071 Score = 376 bits (416), Expect = 8e-102 Identities = 277/321 (86%), Gaps = 5/321 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||| ||| | ||||| | || |||| ||| | ||||| |||||||||||| Sbjct 26766 GTTCTCATTCCGATTGCGAGACCTATAAAGGCCCCGTACCGTTATTTCTTGTCACTACCT 26707 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||| Sbjct 26706 CCCCGAATCGGGATTGGGTAATTTTCGTGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTT 26647 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct 26646 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTGCAACCATGGTA 26587 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 26586 AGCCACTACCTTACCATCGACAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCG 26527 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG---GAGCCCCGAAG--GGCG 295 ||||||||||||||||| ||||||| ||||||||||||| | | |||| | || Sbjct 26526 CAAGGCCATGCGATTCGAAAAGTTATCATGAATCACCAAGCAAGCGGACCGAGGCCCGCA 26467 Query 296 TTGGTTTTTTATCTAATAAAT 316 ||||||||| |||||||||| Sbjct 26466 TTGGTTTTTAGTCTAATAAAT 26446 >seq2448 Length=98618 Score = 304 bits (336), Expect = 4e-80 Identities = 236/280 (84%), Gaps = 1/280 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||| ||| | ||||| | || |||| || | ||||| |||||||||||| Sbjct 92022 GTTCTCATTCTGATTGCGAGACCTATAAAGGCCCCATACCGTTATTTTTTGTCACTACCT 91963 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | ||||||||||||||||| | |||||||||||||||| ||||||||||||||| Sbjct 91962 CCC-GAATCGGGATTGGGTAATTTTTGTGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTT 91904 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| |||||||||||| |||| |||| || ||||||||| Sbjct 91903 TCTCAGGCTCCCTCTCCGGAATTGAACCCTAATTCTCCGTCACCCAATGCAACCATGGTA 91844 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||| | ||||||| | | ||||||||||||||||||||||||| |||||| ||| Sbjct 91843 AGCCACTACCTTACCATCAACATTTGATAGGGCAGAAATTTGAATGAAACATCGCTGGCG 91784 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG 280 ||||||||||| ||| | ||||||| | ||||||||||| Sbjct 91783 CAAGGCCATGCAATTGGAAAAGTTATCAAGAATCACCAAG 91744 >seq9416 Length=21965 Score = 273 bits (302), Expect = 7e-71 Identities = 227/276 (82%), Gaps = 1/276 (0%) Strand=Plus/Plus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||| ||| | |||| | || |||| ||| | ||||| ||||||||||||||| Sbjct 14050 TCATTCTGATTGCGTGACCTATAAAGGCCCCGTACCGTTATTTCTTGTCACTACCTCCC- 14108 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 | || ||||| |||||||| | |||||||||||||||| |||||||||||| |||||| Sbjct 14109 GAATCAGGATTAGGTAATTTTTGTGCCTGCTGCCTTCCTTAGATGTGGTAGCCATTTCTC 14168 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 |||||||||||| ||||| |||| ||||||| |||| | || || ||||||||| ||| Sbjct 14169 AGGCTCCCTCTCTGGAATTGAACTCTAATTCTCCGTCAGCCAATGCAACCATGGTAAGCC 14228 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 |||| | ||||||| | | || |||||| ||||||||||||||| |||||||||| |||| Sbjct 14229 ACTACCTTACCATCAACATTTCATAGGGAAGAAATTTGAATGAAACATCGCCGGCGCAAG 14288 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAG 280 ||||||| ||| | ||||||| ||||||||||||| Sbjct 14289 GCCATGCAATTGGAAAAGTTATCATGAATCACCAAG 14324 >seq332 Length=247022 Score = 111 bits (122), Expect = 5e-22 Identities = 117/153 (76%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 ||||| || |||||||| | | || |||||||||||| |||||| | ||| | Sbjct 217309 TTAGCAATAAAATTACCATAGGTGGCCTTGTAGTAAGGTAAAATCAAACAGTTAATAGGT 217250 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGC 470 ||| ||| ||||||| ||| || || ||||| | || |||||||||||||| ||||| Sbjct 217249 AATTAAATAAGCCATTTGCAACTTTACAGTATA-AGTGTTTATACTTAGACATAAATGGC 217191 Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCA 503 | ||||||||| |||||| ||||| || ||||| Sbjct 217190 TAAATCTTTGACACAAGCTTATGAATAATGGCA 217158 >seq4873 Length=55616 Score = 100 bits (110), Expect = 9e-19 Identities = 82/97 (85%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGA 405 ||||||||||| |||||| ||||| ||||||| |||||| |||| |||||| || || Sbjct 26950 ATGTATTAGCT-TAGAATCACCACATATATCCATCTAGTAAAGTACAATCAAACAATTGA 27008 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT 442 ||||||| ||||||| |||||||||||| ||| |||| Sbjct 27009 TAACTGA-TTAATGAACCATTCGCAGTTACACAGTAT 27044 >seq5739 Length=46716 Score = 93.3 bits (102), Expect = 1e-16 Identities = 105/141 (74%), Gaps = 21/141 (15%) Strand=Plus/Minus Query 373 TATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATT------ 426 ||||||||||||||||||| || ||||||||||||||||||||||| || | || Sbjct 13261 TATCCATGTAGTAAGGTACAATAAAATAAACGATAACTGATTTAATAAGACGTTTCAGAA 13202 Query 427 -----CGC----AGTTTCACTGTAT-AGATT-----GCTTATACTTAGACATGCATGGCT 471 || | || |||| | ||| | |||||||||||||||||||||| Sbjct 13201 AACAAGGCTTATACTTATGCTGTTTCAGAGTACAAGGCTTATACTTAGACATGCATGGTA 13142 Query 472 TAATCTTTGAGACAAGCATAT 492 |||| |||||||||||||||| Sbjct 13141 TAATTTTTGAGACAAGCATAT 13121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510084084736