Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq57421 163 4e-38 seq158401 158 2e-36 seq103951 154 2e-35 seq154342 123 4e-26 seq123063 96.9 5e-18 seq150193 87.8 3e-15 >seq57421 Length=2368 Score = 163 bits (180), Expect = 4e-38 Identities = 182/235 (77%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||| | Sbjct 1906 GTACAAAGGGCAGGGACGTAATCAACACGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1963 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| | | || |||| ||| | |||| | ||||| | ||| | | ||| Sbjct 1964 CTCGTTCATGGGGAAGAATTACAAGCCCCAGTCCCTAGCACGAAAGAGGTTCTACGGATT 2023 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||| || | ||| || | || | ||| | |||||||||||||||||| Sbjct 2024 GCCCGACCCTCTCAGGTTAGGA-ATCGTACCCTCTGATTCTTTCAGTGTAGCGCGCGTGC 2082 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||| ||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 2083 GGCCCCAAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 2136 >seq158401 Length=12963 Score = 158 bits (174), Expect = 2e-36 Identities = 181/237 (76%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||| | Sbjct 713 GTACAAAGGGCAGGGACGTAATCAACACGAGCT-GATGACTCGCGCTTACTAGGAATT-C 656 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 ||||| | | || |||| ||| | |||| | ||||| | ||| | | ||| Sbjct 655 TTCGTTCATGGGGAAGAATTACAAGCCCCAGTCCCTAGCACGAAAGAGGTTCTACGGATT 596 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| || | ||| || || | ||| | ||| ||||||||||||||| Sbjct 595 GCCCGACCCTCTCAGGTTAGGA-ATCTACCCTCTGATTCTTTCATTGTAGCGCGCGTGCG 537 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236 |||| |||||||||||||||||| ||||||||||||| ||||| || ||||| || Sbjct 536 GCCCCGAACATCTAAGGGCATCATAGACCTGTTATTG-CTCAATCTCGTGTGGCTTA 481 >seq103951 Length=1210 Score = 154 bits (170), Expect = 2e-35 Identities = 180/235 (77%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||| | Sbjct 34 GTACAAAGGGCAGGGACGTAATCAACACGAGCT-GATGACTCGCGCTTACTAGGAATT-C 91 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| | || |||| ||| | || | | ||||| | ||| | | ||| Sbjct 92 CTCGTTCATAGGGAAGAATTACAAGCCCCAGTCTCTAGCACGAAAGAGGTTCTACGGATT 151 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||| || | ||| || | || | || | |||||||||||||||||| Sbjct 152 GCCCGACCCTCTCAGGTTAGGA-ATCGTACCCTCCGATTCTTTCAGTGTAGCGCGCGTGC 210 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||| |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 211 GGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 264 >seq154342 Length=95412 Score = 123 bits (136), Expect = 4e-26 Identities = 175/235 (74%), Gaps = 11/235 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||| || ||||| ||||| ||| ||||||||| |||||||||| | Sbjct 2257 GTACAAAGGGCAGGG---TAATCAACACGAGCC-GAT-ACTCGCGCTAACTAGGAATT-C 2310 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| | | || |||| ||| | |||| | ||||| | ||| | | ||| Sbjct 2311 CTCGTTCATGGG-AAGAATTACAAGCCCCAGTCCCTAGCACGAAAGAGGTTCTACGGATT 2369 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| || || | ||| || | || | ||| | ||| |||||||||||||| Sbjct 2370 GCCCGACCCCCTCAGGTTAGGA-ATCGTACCCTCTGATTCTTTCATTGTAGCGCGCGTGC 2428 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||| |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 2429 GGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 2482 >seq123063 Length=307 Score = 96.9 bits (106), Expect = 5e-18 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| Sbjct 237 TCAGTGTAGCGCGCGTGCGGCCCCGAACATTTAAGGGCATCACAGACCTGTTATTG-CTC 179 Query 221 AAACTTCCGTGGC 233 || || ||||| Sbjct 178 AATCTCGTGTGGC 166 >seq150193 Length=5737 Score = 87.8 bits (96), Expect = 3e-15 Identities = 69/80 (86%), Gaps = 2/80 (3%) Strand=Plus/Minus Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64 |||||||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||| Sbjct 100 AAAGGGCAGGGACGTAATCAACACGAGCT-GATGACTCGCGCTTACTAGGAA-TTCCTCG 43 Query 65 TTGAAGACCAACAATTGCAA 84 || | | || |||| ||| Sbjct 42 TTCATGGGGAAGAATTACAA 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750627455005