Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq103951 113 8e-23 seq158401 111 3e-22 >seq103951 Length=1210 Score = 113 bits (124), Expect = 8e-23 Identities = 176/248 (71%), Gaps = 8/248 (3%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGG 132 ||||| | |||||| ||||||||||||||||||| | || ||| ||| |||||| Sbjct 929 TTACTGTAAAAAAAATAGAGTGTTCAAAGCAGGCTCATATGTTCGGATAGTCGTGCATGG 870 Query 133 AATAATAGAATAGG--ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||| ||||| | || ||| || || |||||| || ||| | |||||| Sbjct 869 AATAACTGAATACGTGACTGGCGCTT---TTCAGTTGGTCTCGGCGACTGGTCAAATGAT 813 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| | |||||| | |||| || ||||||||||||||||||| Sbjct 812 TAAGAGGGACTGCCGGGGGCATAGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTC 753 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||| ||| | |||||| | || ||||| |||| ||||||||||| |||||||| Sbjct 752 GCCAGACCAACAAAAGCGAAAACATTTGCCAAGAATGTCTTCATTAATCA-AGAACGAAA 694 Query 311 GTTAGGGG 318 || || || Sbjct 693 GTCAGAGG 686 >seq158401 Length=12963 Score = 111 bits (122), Expect = 3e-22 Identities = 165/230 (72%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGG 132 ||||| |||||||||||||||||||||||||||| | || ||| ||| |||||| Sbjct 12733 TTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTCATATGTTCGGATAGTCGTGCATGG 12792 Query 133 AATAATAGAATAGG--ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||| ||||| | || ||| || || |||||| || ||| | | |||||| Sbjct 12793 AATAACTGAATACGTGACTGGCGCTT---TTCAGTTGGTCTCGGCGACTGGCA-AATGAT 12848 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| | | |||| | |||| || ||||||||||||||||||| Sbjct 12849 TAAGAGGGACTGCCAGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTC 12908 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 |||| ||| | |||||||| || ||||| |||| ||||||||||| Sbjct 12909 GCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA 12958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913475699136