Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq77133 170 8e-40 seq152678 167 1e-38 seq158401 104 1e-19 seq82549 77.0 1e-11 >seq77133 Length=484 Score = 170 bits (188), Expect = 8e-40 Identities = 115/129 (89%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||| || |||| ||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 332 GAGCGTACATGTTAGGACCCGAAAGATGGTGAACTATGCCTGAGTAGGTTGAAGCCAGAG 273 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||||| || |||| ||||| ||||||||||||||||| || ||||| | Sbjct 272 GAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGAACTTGGGGA 213 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 212 TAGGGGCGA 204 >seq152678 Length=4630 Score = 167 bits (184), Expect = 1e-38 Identities = 109/120 (91%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| Sbjct 3128 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGAGTAGGTTGAAGCCAGAGGAAATTCTG 3187 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||| ||||| ||||||||||||||||| || |||||||||||||||| Sbjct 3188 GTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGAACTTGGGTATAGGGGCGA 3247 Score = 120 bits (132), Expect = 1e-24 Identities = 102/125 (82%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| ||||||||| | || |||| |||||| | | ||||| ||||||| Sbjct 2432 GAGTCGGGTTGTTTGAGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 2491 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| ||| |||||||| ||||||| |||| ||||| |||||||||||||| | Sbjct 2492 ACTGGCACGAGTCCGATAGCAAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTTTG--A 2549 Query 160 AGAGA 164 ||||| Sbjct 2550 AGAGA 2554 >seq158401 Length=12963 Score = 104 bits (114), Expect = 1e-19 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 68 AAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGT 127 || |||| |||||| | | ||||| |||||||| | || ||| |||||||| |||||| Sbjct 2275 AAGTGGGTGGTAAACTCCATCTAAGGCTAAATACTTGCACGAGTCCGATAGCAAACAAGT 2334 Query 128 AGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTT 187 | |||| ||||| |||||||||||||| | |||||||| | || |||||||| ||| Sbjct 2335 ACCGTGAGGGAAAGTTGAAAAGCACTTTGAAGAGAGAGTTGGACAGTACGTGAAACCGTT 2394 Query 188 GAAAGGGAAGCG 199 | ||| || || Sbjct 2395 TACAGGTAAACG 2406 >seq82549 Length=334 Score = 77.0 bits (84), Expect = 1e-11 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 |||| || |||| ||||||||||||||||||||||||||||| |||| |||||||| Sbjct 57 GAGCGTACATGTTAGGACCCGAAAGATGGTGAACTATGCCTGAGTAGGTTGAAGCCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2075958669850