Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq186073 78.8 2e-12 seq178419 75.2 2e-11 >seq186073 Length=15782 Score = 78.8 bits (86), Expect = 2e-12 Identities = 78/100 (78%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||| |||||| || ||||||||||| ||| |||||| | | ||| |||||||| ||| Sbjct 14873 TAAATTTAACCTTTCGCATGACGGTCTTAACTTAGCTCA-GGTACCTGTTAGTGGGCGAA 14931 Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA 142 |||| |||||||| |||| |||||| ||||| ||| Sbjct 14932 CAATACAACGCTTTGGGAATAGTGCTTCATAATGATCGGA 14971 >seq178419 Length=15015 Score = 75.2 bits (82), Expect = 2e-11 Identities = 75/96 (78%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||| |||||| || ||||||||||| ||| |||||| | | ||| |||||||| ||| Sbjct 14333 TAAATTTAACCTATCGCATGACGGTCTTAACTTAGCTCA-GGTACCTGTTAGTGGGCGAA 14391 Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGAT 138 |||| |||||||| |||| |||||| ||||| Sbjct 14392 CAATTCAACGCTTTGGGAATAGTGCTTCATCATGAT 14427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852790250592