Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq57421 192 1e-46 seq158401 188 1e-45 seq103951 183 6e-44 seq154342 152 1e-34 seq123063 105 1e-20 seq150193 104 4e-20 >seq57421 Length=2368 Score = 192 bits (212), Expect = 1e-46 Identities = 202/259 (78%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 2162 CTTCTTAGAGGGACAAGTGGCGCTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 2105 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||||||| ||||||||||||||||||||||| ||| || | || | Sbjct 2104 ATGCCCTTAGATGTTTGGGGCCGCACGCGCGCTACACTGAAAGAATCAGAGGGTACGATT 2045 Query 191 CCTTGGCCG-GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| | | || |||| ||| |||| || |||| ||||||| |||| | | || Sbjct 2044 CCTAACCTGAGAGGGTC-GGGCAATCCGTAGAACCTCTTTCGTGCTAGGGACTGGGGCTT 1986 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | |||| || | | | |||||||||| ||||||||||||| ||||||||| || |||||| Sbjct 1985 GTAATTCTTCCCCATGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGTGTTGAT 1926 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 1925 TACGTCCCTGCCCTTTGTA 1907 >seq158401 Length=12963 Score = 188 bits (208), Expect = 1e-45 Identities = 202/259 (78%), Gaps = 6/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| || | ||||| ||||||||||||| || Sbjct 458 CTTCTTAGAGGGACAAGTGGCGCTAAGCCACACGA-GATTGAG-CAATAACAGGTCTATG 515 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||| ||||||||||||||||||| ||| ||| || | || || Sbjct 516 ATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACAATGAAAGAATCAGAGGGTAGATT- 574 Query 191 CCTTGGCCG-GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| | | || |||| ||| |||| || |||| ||||||| |||| | | || Sbjct 575 CCTAACCTGAGAGGGTC-GGGCAATCCGTAGAACCTCTTTCGTGCTAGGGACTGGGGCTT 633 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | |||| || | | | ||||| |||| ||||||||||||| ||||||||| || |||||| Sbjct 634 GTAATTCTTCCCCATGAACGAAGAATTCCTAGTAAGCGCGAGTCATCAGCTCGTGTTGAT 693 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 694 TACGTCCCTGCCCTTTGTA 712 >seq103951 Length=1210 Score = 183 bits (202), Expect = 6e-44 Identities = 200/259 (77%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 290 CTTCTTAGAGGGACAAGTGGCGCTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 233 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||| ||||||||||||||||||||||| ||| | | || | Sbjct 232 ATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACACTGAAAGAATCGGAGGGTACGATT 173 Query 191 CCTTGGCCG-GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| | | || |||| ||| |||| || |||| ||||||| | || | | || Sbjct 172 CCTAACCTGAGAGGGTC-GGGCAATCCGTAGAACCTCTTTCGTGCTAGAGACTGGGGCTT 114 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | |||| || | | |||||||||| ||||||||||||| ||||||||| || |||||| Sbjct 113 GTAATTCTTCCCTATGAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGTGTTGAT 54 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 53 TACGTCCCTGCCCTTTGTA 35 >seq154342 Length=95412 Score = 152 bits (168), Expect = 1e-34 Identities = 199/264 (75%), Gaps = 20/264 (8%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||| | |||| || | ||||| |||||||||||||||| Sbjct 2508 CTTCTTAGAGGGACAGGTGGCGCTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 2451 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA------CAGAGCCAACGAGT 184 |||||||||||||||| ||||||||||||||||||| ||| ||||| |||| | Sbjct 2450 ATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACAATGAAAGAATCAGAGGGTACGA-T 2392 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || | |||| | || |||| ||| |||| || |||| ||||||| |||| | Sbjct 2391 TCCTAACCT--GAGGG--GGTC-GGGCAATCCGTAGAACCTCTTTCGTGCTAGGGACTGG 2337 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | ||| |||| || | | | |||||||||| |||||| |||||| || ||| || || | Sbjct 2336 GGCTTGTAATTCTT-CCCATGAACGAGGAATTCCTAGTTAGCGCGAGT-ATCGGCTCGTG 2279 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 ||||||| |||||||||||||| Sbjct 2278 TTGATTA---CCCTGCCCTTTGTA 2258 >seq123063 Length=307 Score = 105 bits (116), Expect = 1e-20 Identities = 88/104 (85%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 140 CTTCTTAGAGGGACAAGTGGCGCTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 197 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174 ||||||||| |||||| ||||||||||||||||||||||| ||| Sbjct 198 ATGCCCTTAAATGTTCGGGGCCGCACGCGCGCTACACTGAAAGA 241 >seq150193 Length=5737 Score = 104 bits (114), Expect = 4e-20 Identities = 83/100 (83%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || ||||||| |||| | | ||| |||| || | | | |||||||||| ||||||||| Sbjct 1 CTTTCGTGCTAGGGACTGGGGCTTGTAATTCTTCCCCATGAACGAGGAATTCCTAGTAAG 60 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325 |||| ||||||||| || |||||||||||||||||||||| Sbjct 61 CGCGAGTCATCAGCTCGTGTTGATTACGTCCCTGCCCTTT 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945415408896