Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq52247 113 7e-23 seq175250 109 9e-22 seq147291 109 9e-22 seq137832 95.1 2e-17 seq72172 89.7 8e-16 seq81601 75.2 2e-11 >seq52247 Length=4280 Score = 113 bits (124), Expect = 7e-23 Identities = 95/114 (83%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| | | || ||||| ||||| | Sbjct 983 GTACGAGAGGAACCGCAGT-TTCAGAC-ATTTGGTTTGCGTGTTTGCCTGACAAGGCAAT 926 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 925 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 872 >seq175250 Length=6153 Score = 109 bits (120), Expect = 9e-22 Identities = 94/114 (82%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| | | || ||||| ||||| | Sbjct 4925 GTACGAGAGGAACCGCAGT-TTCAGAC-ATTTGGTTTACGTGTTTGCCTGACAAGGCAAT 4868 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| ||||||| |||||||||||||||| Sbjct 4867 GGTGCGAAGCTACCATCTGAAGGATTATGACTGAACGTCTCTAAGTCAGAATCC 4814 >seq147291 Length=5242 Score = 109 bits (120), Expect = 9e-22 Identities = 94/114 (82%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||| |||| | |||||| | ||||||| | | || ||||| ||||| | Sbjct 454 GTACGAGAGGAGCCGCAGT-TTCAGAC-ATTTGGTTTACGTGTTTGCCTGACAAGGCAAT 511 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 512 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 565 >seq137832 Length=471 Score = 95.1 bits (104), Expect = 2e-17 Identities = 78/94 (83%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80 |||||| | ||||||| | | || ||||| ||||| || |||||||||||||||| Sbjct 95 TTCAGAC-ATTTGGTTTACGTGTTTGCCTGACAAGGCAATGGTGCGAAGCTACCATCTGA 37 Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||| |||||||||||||||||||||||| Sbjct 36 GGGATTATGACTGAACGCCTCTAAGTCAGAATCC 3 >seq72172 Length=6931 Score = 89.7 bits (98), Expect = 8e-16 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 51 ACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGA 110 |||||||| || |||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 6650 ACCAGGCAATGGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGA 6709 Query 111 ATCC 114 |||| Sbjct 6710 ATCC 6713 >seq81601 Length=7654 Score = 75.2 bits (82), Expect = 2e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 2370 GCGAAGCTACCATCTGAGCGATTATGACTGAACGCCTCTAAGTCAGAATCC 2420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817704802048