Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq158401 333 8e-89 seq102458 241 4e-61 seq115412 228 2e-57 seq107590 158 4e-36 seq50704 149 2e-33 seq153033 134 4e-29 seq111724 134 4e-29 seq154221 127 6e-27 seq103320 113 1e-22 seq100708 95.1 4e-17 seq179080 82.4 2e-13 >seq158401 Length=12963 Score = 333 bits (368), Expect = 8e-89 Identities = 389/518 (75%), Gaps = 27/518 (5%) Strand=Plus/Minus Query 10 CCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGT 68 |||||||| | || |||||||| || |||| ||||| | ||||||||||| |||||| Sbjct 12508 CCAATTACGGGGCCTCAAAAGAGTCCCGTATTGTTATTTTTCGTCACTACCTCGCCGTGT 12449 Query 69 CGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGC 128 ||| |||||||||||||||||||||||||||||||||||| |||| ||| ||||||| || Sbjct 12448 CGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATCTGGTCGCCATTTCTCATGC 12389 Query 129 TCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTA 188 ||||||||||||||||||||| |||||||| |||||||| ||| | ||||| || Sbjct 12388 GCCCTCTCCGGAATCGAACCCTGATTCCCCGCTACCCGTTACCCCCACGATAGGCTGTTA 12329 Query 189 TCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCA 248 | || | |||| || |||||||||| | ||||| || ||||| | || | |||||| Sbjct 12328 ACTTAACGTCGACAGGTGATAGGGCATACGCTTGAAAGATACATCGACAGCACGAGGCCA 12269 Query 249 TGCGATTCGTTAAGTTATTAT---GAATCACCAAGGAGCCCCGAAGGG----------CG 295 | ||||| | | ||| ||| || ||||| || | ||||||| || Sbjct 12268 TTCGATTGACTGA-TTAATATCCAGAGTCACCTAG--ACTACGAAGGGTTGCCCCAAACG 12212 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTA 353 | | | || ||||||| | | | || | ||| | | |||||||||| Sbjct 12211 GTAGGTCTTGGTCTAATATGAGCGTTCTTCCCCTAGGGTCAGAACTGAGTGCATGTATTA 12152 Query 354 GCTCTAGAATTACCACGGTTATCCAT-GT--AGTAAG----GTACTATCAAATAAACGAT 406 |||||||||||||||| ||||||| | || | || | |||| ||| || ||| | Sbjct 12151 GCTCTAGAATTACCACAGTTATCCTTAGTCCATTACGGACAGTACGATCTAAGAAATCAC 12092 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 | |||||||||| ||||||||||||||| ||||||| | || | |||||| || |||| Sbjct 12091 ATATGATTTAATGTGCCATTCGCAGTTTCGCTGTATA-AAGGCGTGTACTTACACGTGCA 12033 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| ||||||||||| Sbjct 12032 TGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 11995 >seq102458 Length=302 Score = 241 bits (266), Expect = 4e-61 Identities = 204/250 (82%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||||||||| | || |||||||| || |||| | ||| | ||||||||| Sbjct 252 GTGCTCATTCCAATTACGGGGCCTCAAAAGAGTCCCGTATTGTTTTTTTTCGTCACTACC 193 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 || ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 192 TCGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTCGCCAT 133 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| || ||||||||||||||||||||| |||||||| |||||||| ||| | | Sbjct 132 TTCTCATGCGCCCTCTCCGGAATCGAACCCTCATTCCCCGCTACCCGTTACCCCCACGAT 73 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || |||| | |||| || |||||||||| | ||||| || ||||| | || Sbjct 72 AGGCTGTTAACCTAACGTCGACAGGTGATAGGGCATACGCTTGAAAGATACATCGACAGC 13 Query 240 TCAAGGCCAT 249 | ||||||| Sbjct 12 ACGAGGCCAT 3 >seq115412 Length=5449 Score = 228 bits (252), Expect = 2e-57 Identities = 188/228 (82%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||||||||| | || |||||||| || |||| ||||| | ||||||||| Sbjct 294 GTGCTCATTCCAATTACGGGGCCTCAAAAGAGTCCCGTATTGTTATTTTTCGTCACTACC 353 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 || ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 354 TCGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTCGCCAT 413 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| || |||||||||||||||||||| |||||||| |||||||| ||| | | Sbjct 414 TTCTCATGCGTCCTCTCCGGAATCGAACCCTGATTCCCCGCTACCCGTTACCCCCACGAT 473 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 |||| || |||| | |||| || |||||||||| | ||||| || Sbjct 474 AGGCTGTTAACCTAACGTCGACAGATGATAGGGCATACGCTTGAAAGA 521 Score = 152 bits (168), Expect = 2e-34 Identities = 137/168 (82%), Gaps = 8/168 (5%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCAT-GT--AGTAAGG----TACTATCA 396 ||||| |||||||||||||||||||| ||||||| | || | || || ||| ||| Sbjct 753 GCATGCATTAGCTCTAGAATTACCACAGTTATCCTTAGTCCATTACGGACAGTACGATCT 812 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| | | |||||||||||||||||||||||||| |||||| | || | |||| Sbjct 813 AAGAAATCACATATGATTTAATGAGCCATTCGCAGTTTCGTTGTATAAAG-GCGTGTACT 871 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || || ||||||||||||||||||| |||||||||| ||||||||||| Sbjct 872 TACACGTGCATGGCTTAATCTTTGAAACAAGCATATAACTACTGGCAG 919 >seq107590 Length=358 Score = 158 bits (174), Expect = 4e-36 Identities = 138/168 (82%), Gaps = 8/168 (5%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCAT-GT--AGTAAGG----TACTATCA 396 |||||||||||||||||||||||||| ||||||| | || | || || ||| ||| Sbjct 25 GCATGTATTAGCTCTAGAATTACCACAGTTATCCTTAGTCCATTACGGACAGTACGATCT 84 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| | | ||| |||||||||||||||||| ||| ||||||| | || | |||| Sbjct 85 AAGAAATCACATATGAATTAATGAGCCATTCGCAGATTCGCTGTATAAAG-GCGTGTACT 143 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || || |||||||||||||||||||||||||||||| ||||||||||| Sbjct 144 TACACGTGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 191 >seq50704 Length=19253 Score = 149 bits (164), Expect = 2e-33 Identities = 91/97 (94%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 2 CCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTCGCCATTTC 61 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCG 159 ||| || ||||||||||||||||||||| |||||||| Sbjct 62 TCATGCGCCCTCTCCGGAATCGAACCCTGATTCCCCG 98 >seq153033 Length=1324 Score = 134 bits (148), Expect = 4e-29 Identities = 83/89 (93%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 74 TTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCT 133 |||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||| Sbjct 1324 TTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTCGCCATTTCTCATGCGCCCT 1265 Query 134 CTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||||| |||||||| || Sbjct 1264 CTCCGGAATCGAACCCTGATTCCCCGCTA 1236 >seq111724 Length=1047 Score = 134 bits (148), Expect = 4e-29 Identities = 83/89 (93%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 74 TTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCT 133 |||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||| Sbjct 1047 TTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTCGCCATTTCTCATGCGCCCT 988 Query 134 CTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||||| |||||||| || Sbjct 987 CTCCGGAATCGAACCCTGATTCCCCGCTA 959 >seq154221 Length=451 Score = 127 bits (140), Expect = 6e-27 Identities = 120/149 (81%), Gaps = 8/149 (5%) Strand=Plus/Plus Query 363 TTACCACGGTTATCCAT-GT--AGTAAGG----TACTATCAAATAAACGATAACTGATTT 415 ||||||| ||||||| | || | || || ||| ||| || ||| | | |||||| Sbjct 1 TTACCACAGTTATCCTTAGTCCATTACGGACAGTACGATCTAAGAAATCACATATGATTT 60 Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475 |||||||||||||||||||| ||||||| | || | |||| | || ||||||||||||| Sbjct 61 AATGAGCCATTCGCAGTTTCGCTGTATAAAG-GCGTGTACTCACACGTGCATGGCTTAAT 119 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||| ||||||||||| Sbjct 120 CTTTGAGACAAGCATATAACTACTGGCAG 148 >seq103320 Length=4409 Score = 113 bits (124), Expect = 1e-22 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 85 GCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCG 144 ||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||| Sbjct 4409 GCGCGCCTGCTGCCTTCCTTGGATGTGGTCGCCATTTCTCATGCGCCCTCTCCGGAATCG 4350 Query 145 AACCCTAATTCCCCG 159 |||||| |||||||| Sbjct 4349 AACCCTGATTCCCCG 4335 >seq100708 Length=6634 Score = 95.1 bits (104), Expect = 4e-17 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 99 TTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCC 158 ||||||||||||||| ||| ||||||| || ||||||||||||||||||||| ||||||| Sbjct 1 TTCCTTGGATGTGGTCGCCATTTCTCATGCGCCCTCTCCGGAATCGAACCCTGATTCCCC 60 Query 159 GTTACCCGTT 168 | ||||||| Sbjct 61 GCAACCCGTT 70 >seq179080 Length=4514 Score = 82.4 bits (90), Expect = 2e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCG 159 |||||||||||| ||| ||||||| || ||||||||||||||||||||| |||||||| Sbjct 1 CTTGGATGTGGTCGCCATTTCTCATGCGCCCTCTCCGGAATCGAACCCTGATTCCCCG 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1507554300672