Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq60558 149 5e-31 seq44860 129 5e-25 seq172076 113 4e-20 seq18922 93.3 3e-14 >seq60558 Length=5495 Score = 149 bits (164), Expect = 5e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322 || ||||| || || || | |||||||| |||||||| |||| ||| || || Sbjct 2358 TCTCCCCACACATCATCGAGCCCTGGACACTCCGCCGGACACATGAGCGTCCACTCGCCG 2299 Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 | | || || || ||| || ||||| || ||||||| || || |||||||| ||| Sbjct 2298 TTCGCCTCAACGCGCTTCATGAAGAGATCCGGGATCCAGACCGCATAAAAGAGATCACGT 2239 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 ||||| |||||||| ||||| || ||||| |||||||||| |||||||||||||| Sbjct 2238 GCTCGCTGCTCCTCCTTGCCGGTGTTCTTGCGGCAGTCGAGGAAATCAAAGATGTCGGCG 2179 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCC 66474 |||||||| || ||||||||||| |||| ||| Sbjct 2178 TGCCATGGCTCGAGGTAGATGGCAAACGCGCC 2147 Score = 138 bits (152), Expect = 9e-28 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 66037 CTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCC 66096 ||| || ||| | ||||||| ||||| || |||||||| || ||||| |||||||| Sbjct 3774 CTCATCGGGACTGCTATACTCCACAATCTCCGTGCACAGGTTGCTGCACTTGATGGTGCC 3715 Query 66097 CAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCC 66156 ||| |||||||| || ||||| || ||||| || |||||||||| ||| || || ||||| Sbjct 3714 CAAGTTCTGTTGGTTGCTCTTCCGGTTGCAGGCGTCCTTGTACAGCATATAGGGCGTGCC 3655 Query 66157 GGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 || || ||||||| ||| |||||||||| ||| || Sbjct 3654 TGTTTCTACTTGGGCCTCGATGATGGCGTACCACAG 3619 Score = 100 bits (110), Expect = 2e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 65689 TCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAA 65748 ||| ||||||||||| | ||| || || ||| ||| || |||| ||||| || ||||| Sbjct 4796 TCCTTCCTCCTTGGCCAATTGGCAACTCATCTTGAGCGCACCAAAGTAAATCGTTTCGAA 4737 Query 65749 AATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAA 65808 || | || ||||| | ||||| | || ||| |||| | | |||| || || Sbjct 4736 GATCTGCTTGTTCAGTTCCTGGGCCTCGGCACTTTCGAACGGAAATCGCATCTTGATGAA 4677 Query 65809 AGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAA 65863 || || || |||||||| || || |||||||||||||| ||||||| |||||| Sbjct 4676 AGCATCCGCAAGACCTTGCACACCGATACCGATGGGACGGTGACGCATGTTGGAA 4622 >seq44860 Length=53707 Score = 129 bits (142), Expect = 5e-25 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 66037 CTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCC 66096 ||| || ||| | ||||||| ||||| || ||||||| || ||||| |||||||| Sbjct 4487 CTCATCGGGACTGCTATACTCCACAATCTCCGTGCACAAGTTGCTGCACTTGATGGTGCC 4428 Query 66097 CAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCC 66156 ||| |||||||| || ||||| || ||||| || |||||||| | |||||| ||||| || Sbjct 4427 CAAGTTCTGTTGGTTGCTCTTCCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGAGTTCC 4368 Query 66157 GGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 |||||| ||||| | ||| || ||||| | ||| || Sbjct 4367 GGTCTCGACTTGCGCCTCGATAATGGCATACCACAG 4332 Score = 122 bits (134), Expect = 7e-23 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 |||||||| |||| ||| || || | | ||| || || ||| || ||||| || ||| Sbjct 3357 GGACACATGAGCGTCCATTCGCCGTTCGCTTCCACGCGCTTCATGAAGAGATCCGGGATC 3298 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 |||| || || |||||||| ||||||| || || || ||||| || ||||| || Sbjct 3297 CAGACAGCATAAAAGAGATCACGTGCTCTCTGTTCTTCTTTGCCGGTGTTCTTGCGGCAG 3238 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 |||||||| || ||||||||||| ||||| || || ||||||||||| || Sbjct 3237 TCGAGGAAGTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAA 3188 Score = 93.3 bits (102), Expect = 3e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 65690 CCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAA 65749 || ||||||||||| | ||| || || | | ||| || |||| ||||| || ||||| Sbjct 5465 CCTTCCTCCTTGGCCAATTGGCAACTCATTTTGAGCGCACCAAAGTAAATAGTTTCGAAG 5406 Query 65750 ATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAA 65809 || | || ||||| | |||||| |||||||| |||| | | ||| || || Sbjct 5405 ATTTGCTTGTTCAGTTCCTGGGCCTCAGCGCTCTCGAACGGAAATCGCATTTTGATGAAG 5346 Query 65810 GTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAA 65863 | || || |||||||| || || ||||||||||| || ||||||| |||||| Sbjct 5345 GCATCCGCAAGACCTTGCACGCCGATACCGATGGGGCGGTGACGCATGTTGGAA 5292 >seq172076 Length=28491 Score = 113 bits (124), Expect = 4e-20 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 ||||| |||||||| || || || || |||||||| ||||| |||||| |||| ||| Sbjct 2585 TTCAACGCCATCGAAACTATGCCCTGCGTCAAGCGGAAGGCGGACTGGGCCATCAAGTGG 2526 Query 61459 ATCACCAGTACAACGGCTA--CATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 |||| | || ||| || | || | || ||| || | || || || | ||||| | Sbjct 2525 ATCAACG--ACGACGCCTCTTCGTTCGCCGAGCGAGTGATCGCGTTCGCTGCCGTCGAAG 2468 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | | |||||| || ||||||||||| || || ||| | ||||| ||||| | |||| Sbjct 2467 GCATCTTTTTCTCGGGCTCGTTTGCCGCCATTTTCTGGCTCAAGAAGCGTGGTATCATGC 2408 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGAT 61604 | || || || |||||||| |||||||| Sbjct 2407 CAGGGCTCACGTTCAGCAACGAGTTGAT 2380 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || ||||| || || || || |||| || || | || | || || |||| |||||| Sbjct 3549 GACAATCCCCGCCGGTTTGTGGTGTTTCCTATTAAATACCATGACATCTGGCAAATGTAC 3490 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 |||||||| ||||| || |||||||| | ||||| || ||| | || |||||| || Sbjct 3489 AAAAAGGCCGAAGCCTCTTTCTGGACTGCAGAGGAAGTGGATCTATCGAAAGACCTGGGC 3430 Query 61162 GACTGGGA-GCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220 ||||||| |||| | || | || | ||| |||||| || || ||||||||||| Sbjct 3429 CACTGGGATACGTTAAAAGA-TGACGAGCGACACTTCATTTCTCACGTCTTGGCGTTCTT 3371 Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTA 61254 || || ||||| |||||||| || ||| || Sbjct 3370 CGCGGCAAGCGACGGCATCGTCAACGAAAATCTA 3337 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || || || ||| |||| || || |||||||| |||| |||||| |||| || || || Sbjct 3016 GAAGTCCAGGTGACGGAAGCTCGCTGTTTCTATGGCTACCAGATCGCCACCGAAAACATC 2957 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||| ||||||||| | ||||||||||| ||||||| ||| Sbjct 2956 CACTCGGAAATGTACAGTCTACTCATCGATACCTACATCAAGGA 2913 >seq18922 Length=6667 Score = 93.3 bits (102), Expect = 3e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || || || ||| |||| || || |||||||| |||| |||||| || | || || || Sbjct 1486 GAAGTCCAGGTGACGGAAGCTCGCTGTTTCTATGGCTACCAGATCGCAACCGAAAACATC 1545 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||||||| ||||||||| | ||||||||||| ||||||| ||| Sbjct 1546 CACTCGGAAATGTACAGTCTACTCATCGATACCTACATCAAGGA 1589 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || ||||| || || || || |||| || || | || | || || |||| |||||| Sbjct 1112 GACAATCCCCGCCGGTTTGTGGTGTTTCCTATAAAATACCATGACATCTGGCAAATGTAC 1171 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 |||||||| ||||| || |||||||| | ||||| || ||| | || |||||| || Sbjct 1172 AAAAAGGCCGAAGCCTCTTTCTGGACTGCAGAGGAAGTGGATCTATCGAAAGACCTGGGC 1231 Query 61162 GACTGGGA-GCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220 ||||||| || | | || | || | || |||||| || || ||||||||||| Sbjct 1232 CACTGGGATACGCTAAAAGA-TGAGGAGCGGCACTTCATTTCTCACGTCTTGGCGTTCTT 1290 Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTA 61254 || || ||||| |||||||| || ||| || Sbjct 1291 CGCGGCAAGCGACGGCATCGTCAACGAAAATCTA 1324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396655100258480