Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq730 168 1e-39 >seq730 Length=6546 Score = 168 bits (186), Expect = 1e-39 Identities = 252/336 (75%), Gaps = 29/336 (9%) Strand=Plus/Plus Query 19 GAAATAGACCCTGAACCCGCGCGC--CTACAAGCGGTCGGAGCCG---AGTGATTCGGTG 73 |||||||| ||||||||| |||| ||||||||||||| |||| |||| || | Sbjct 1824 GAAATAGATCCTGAACCCATGCGCTTCTACAAGCGGTCG-AGCCCTTTAGTGGGGAGGGG 1882 Query 74 ACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGA-GGTTAAGGGC 132 ||||||||||||||||||| ||||||||||||||| ||| || || | || ||| | Sbjct 1883 ACGGCGTGCCTTTTGCATA-TGAGCCTACGAGTTAA-CGTTGCCGGCCAAGGATAATG-- 1938 Query 133 TTCAGGCCCGTTAGCCGAA-GTGAAA-GCGAGC--CTTAACAGGGCGACG--AGTTGGTG 186 || | ||| | ||| | | |||| |||| || ||| |||| | ||| || Sbjct 1939 TTTAAGCCATGGATCCGCACGCGAAAAGCGATGTTCTGAACTAGGCGGCTTTAGTCGGCA 1998 Query 187 GCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGT---TGAAGTCGCGGTAACGC 243 | | |||||||||||| ||| |||||||| | | |||||| ||||| | | ||| | Sbjct 1999 GTGTTAGACGCGAAACGTTG-GATCTACC-ATG-GCAGGTGATTGAAGCTGGGTAAACAC 2055 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | ||||||||||||||||| ||||||||| ||| ||||||||| | |||||||||| Sbjct 2056 CAG-TGGAGGACCGAACCGGTTGACGTTGAAA-GTTCTCGGATGAC-CTTGGGTAGGGGT 2112 Query 304 GAAAGGCCAATCAAA---CTGGGAAATAGCTCGTAC 336 ||||||||||||||| | | ||||||||||||| Sbjct 2113 GAAAGGCCAATCAAAAACTTCGTAAATAGCTCGTAC 2148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972786176512