Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1072 232 1e-58 seq21 114 2e-23 >seq1072 Length=1867 Score = 232 bits (256), Expect = 1e-58 Identities = 216/271 (80%), Gaps = 20/271 (7%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 1342 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 1285 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| | || | | | || ||| | || ||||| ||||||| | |||| | ||| Sbjct 1284 CTCGTTCATGAGCGATAGTTACAAAGCTCAATCCCAATCACGAAGGGGGTTCATCGGATT 1225 Query 120 ACCC--------------GGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGT 165 ||| |||||| |||| ||||| |||| || ||||||| ||||||| Sbjct 1224 CCCCAGGCCGTACCGGCCGGACCTTTCGGTCAAGG--ATAGGCTTGTTGAATGCATCAGT 1167 Query 166 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1166 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCATACT 1107 Query 226 TCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255 ||| | | ||||| | | || |||||| || Sbjct 1106 TCCATTGACTAAACGCCAATAGTCCCTCTAA 1076 >seq21 Length=757752 Score = 114 bits (126), Expect = 2e-23 Identities = 199/268 (74%), Gaps = 26/268 (10%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGG-ACGTAGTCAACGCGAGCTTGATGACTCGC--GCTT-ACTAGGAA 56 |||| || ||||||| ||||| |||||||| | |||||||| |||| ||| ||| Sbjct 129425 GTACCAAAGGCAGGGGACGTAATCAACGCG----TTATGACTCGGCGGCTTTACTGGGA- 129479 Query 57 TTTCCTCGTTGAA-GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA 115 || ||||||| | || | | | || ||| | || ||||| ||||||| | ||||| Sbjct 129480 TTGCCTCGTTCTATGAGCGATAGTTACAAAGCTC-ATCCCAATCACGAAGG--TTTCATC 129536 Query 116 GATTACCCGGACCTGTCGGCCAAGGT--GATAGACTCGTTGAATACATCAGTGTAGCGCG 173 | | || || ||| ||| ||||| || || | |||||| | ||||||||||||| Sbjct 129537 GGATCCCAGG-CCT-TCG-CCAAGTAAGGAAAGCCACGTTGATCCCTTCAGTGTAGCGCG 129593 Query 174 CGT--GCGGCCCAGAACATCTAAGG-GCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||| ||||||| | |||||||||| |||||||||||||||||||| ||||| ||| ||| Sbjct 129594 CGTTCGCGGCCCCGGACATCTAAGGTGCATCACAGACCTGTTATTG-CTCAATCTT-CGT 129651 Query 231 G-GCCT--AAAAGGCCATCTCCCTCGAA 255 | | || ||||| | | |||||| || Sbjct 129652 GCGACTGGAAAAGCGCCTGTCCCTCTAA 129679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751989648015