Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1072 201 2e-49 seq21 75.2 2e-11 >seq1072 Length=1867 Score = 201 bits (222), Expect = 2e-49 Identities = 225/297 (76%), Gaps = 18/297 (6%) Strand=Plus/Plus Query 37 GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTG 96 |||||| |||||||| |||||| || || | || ||||||||||||||||||||||| Sbjct 389 GCATGCTCTTCACTGAGTGTGCTTGGCGACCGGAACGTTTACTTTGAAAAAATTAGAGTG 448 Query 97 TTCAAAGCAGGCCTTTG--CTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 ||||||||||| || || | ||| |||||| ||||| ||||| || | || Sbjct 449 CTCAAAGCAGGCGTTAAGCCTTGTATAATGGTGCATGGGATAATGGAATAAGATTTTTGG 508 Query 155 TTCTATTTTGTTGGTTTCTAG-GACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTC 213 | | || ||||||| | ||| | | | |||||||| |||||| | || |||||| | Sbjct 509 CT-TGTTCTGTTGGTCT-TAGAGTCAGAAGTAATGATAAATAGGAACAGACGGGGGCATT 566 Query 214 AGTATTCA------------ATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAAC 261 ||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct 567 CGTATTGCGGCGTTTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAAC 626 Query 262 TACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||| || |||||||||||||||||||||| ||||||||||| |||| Sbjct 627 TACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 682 >seq21 Length=757752 Score = 75.2 bits (82), Expect = 2e-11 Identities = 207/295 (70%), Gaps = 27/295 (9%) Strand=Plus/Minus Query 34 TCCGCATGC-CCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAA--AAAT 89 || |||||| ||||||||| |||||| || | | ||| | |||||||||| | |||| Sbjct 130357 TCTGCATGCTCCTTCACTGAGTGTGCTTGGTCGACCGGAACGTTTACTTTGACACAAAAT 130298 Query 90 TAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACG 149 ||||||| |||| ||||| | ||| | ||| ||| ||| |||| ||||| || Sbjct 130297 TAGAGTGCTCAA-GCAGG--TAAGCT-GTATAATGGTGCA-GGATTAATGGAATAAGATT 130243 Query 150 T--GCGGTTCTATTTTGTTGGTTTCTAG-GACCGCCG-TAATGATTAA-TAGGGATAGTC 204 | || ||| | | ||||||| |||| | | | | |||||| ||| |||| | || | Sbjct 130242 TTTGCCGTTGT--TCTGTTGGT--CTAGAGTCAGAAGCTAATGAATAAATAGGAACAGAC 130187 Query 205 GGGGGTGTCA--GTATTCAATTGTC-AGAGGTGAAATTCTTGGATTTATTGAAGACTAAC 261 ||||| ||| ||||| || ||||||||| |||||| | | | | || || Sbjct 130186 GGGGGCATCATCGTATTGCGGCGTATAGAGGTGAA-TTCTTGA--TCGTCGCAAACGCAC 130130 Query 262 T--ACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 | ||||| || | | |||| |||||||||||||||| |||||||||||| Sbjct 130129 TCCACTGCCGAAACAATTTGCAAGAATGTTTTCATTAATCA-AGAACGAAAGTTA 130076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915186995008