Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq730 114 1e-23 >seq730 Length=6546 Score = 114 bits (126), Expect = 1e-23 Identities = 135/174 (78%), Gaps = 13/174 (7%) Strand=Plus/Plus Query 13 ATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA-TT 71 |||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| | Sbjct 1307 ATGCCTAG--TCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTGCGGGGACCT 1364 Query 72 GGCACA-TACGAATTGATC-CGTAGATATCC-GAATGGGGCAACCCGATATATTGGAG-A 127 |||||| || | ||||| || ||| |||| ||||||||||||||| ||| || || | Sbjct 1365 GGCACACAACAGAGTGATCGCGCAGAGATCCGGAATGGGGCAACCCGCTATGCTGAAGCA 1424 Query 128 TATATCATAACGCTAGGCGTTAGGCGAA--CGTGGGGAACTGAAACATCTAAGT 179 | || | || ||| | ||| || || | ||||||||||||||||| Sbjct 1425 TGAGCCACACCGATAG----TGGGCAAACCCGCTGAAAACTGAAACATCTAAGT 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476793436401