Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq730 421 2e-115 >seq730 Length=6546 Score = 421 bits (466), Expect = 2e-115 Identities = 317/359 (88%), Gaps = 14/359 (4%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5351 TACCGTAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 5410 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||||||||||||||||||||||||||||||||||||||||| |||||| | || Sbjct 5411 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTTGTAAG-CGATAGT 5469 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCA--CGA-CTAGAGT-GTGT 178 ||||||||||| ||||||||||| |||||||| ||||||| ||| ||||||| || Sbjct 5470 GAAATCCCCGGCTCTAACCTGGGAA-TGCATTTG-GACTGCACTCGAGCTAGAGTACGGT 5527 Query 179 CAGAGGGGGGTGGAATT-CCACGTGTA-GCA-GTGAAATGCGTAGATATGTGGAGGAACA 235 |||| |||| ||||||| || || ||| ||| |||||||||||||||||| ||||||||| Sbjct 5528 CAGA-GGGGATGGAATTGCCGCGGGTACGCAGGTGAAATGCGTAGATATGCGGAGGAACA 5586 Query 236 CCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAG 295 || |||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 5587 CCGATGGCGAAGGCAATCCCCTGGACCTGTACTGACGCTCATGCACGAAAGCGTGGGGAG 5646 Query 296 CAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATAT---CAACTAGTTGTT 351 ||||||||||||||||||||||||||||||||||||||||| | | |||||||||| Sbjct 5647 CAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAATTGTCCTACTAGTTGTT 5705 Score = 114 bits (126), Expect = 3e-23 Identities = 78/88 (89%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 266 ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 325 ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8 ACTGACGCTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 67 Query 326 GCCCTAAACGATATCAACTAGTTGTTGG 353 ||| |||||||| |||||||| || Sbjct 68 GCCGTAAACGATGAGTGCTAGTTGTCGG 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289581674784