Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq730 129 1e-27 seq796 98.7 3e-18 >seq730 Length=6546 Score = 129 bits (142), Expect = 1e-27 Identities = 213/287 (74%), Gaps = 19/287 (7%) Strand=Plus/Minus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60 |||| || || |||||||||| | | | ||||| || ||| ||| || ||||||| Sbjct 3384 GCGGGTAAACGGCATCTTCACCGTTACTACAATTCAAC-GAG-CTCATGGCTGAGACAGT 3327 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA-TTTCGC-TA 118 | | | ||| |||||||||||||||||||| |||||||||||||| |||||| || Sbjct 3326 GTCCCAGACGTA---CCATTCGTGCAGGTCGGAAC-TACCCGACAAGGAATTTTCGCTTA 3271 Query 119 CCTTAGGACCGTTA-TTGTTACGGCCGCCGTTTAC-CGGGGCTTCGATCAAGAGCTT--C 174 ||||| |||||||| | || ||||||||||||||| |||||||| || | |||| Sbjct 3270 CCTTA-GACCGTTACTAGTAACGGCCGCCGTTTACTGGGGGCTTCAATTCAATGCTTTCT 3212 Query 175 GCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGT 234 || || |||| | || |||| ||||| ||||||||||||| | | || |||| | Sbjct 3211 CCGGAAGATAACATCTTCTCTTAA-CTTCCAGCACCGGGCAGGC-TGAGGCCTAATAC-T 3155 Query 235 CCACTTTCGTGTTTG-CAGAGTGCTG-TGTTTTTAATAAACAGTCGC 279 ||||| || |||| ||| ||| ||||||| | ||||| |||| Sbjct 3154 TCACTTGCGATTTTGTGCGAGCCCTGCTGTTTTTGAAAAACATTCGC 3108 >seq796 Length=4978 Score = 98.7 bits (108), Expect = 3e-18 Identities = 225/314 (72%), Gaps = 36/314 (11%) Strand=Plus/Plus Query 69 CGTTACGCC-ATTCGTGCAGGTCGGAACTTACCCGAC-AAGGAATTTCGCTACCTTAGGA 126 ||||||||| |||||| ||||||| ||||||||||| || ||| |||||||| ||||| Sbjct 2031 CGTTACGCCGATTCGT-CAGGTCG--ACTTACCCGACTAACGAAATTCGCTAC--TAGGA 2085 Query 127 CCGTTAT-TGTTACGGCCGCCGTTT-ACCGGGGCT-TCGA----TCAAGAGCTT-CGCGT 178 | ||| ||||||| | |||||| || ||| || || | | || ||||| |||| Sbjct 2086 ACCGTATATGTTACGCCGCCCGTTTTACTGGGACTGTCAAAAATTTAAAAGCTTGCGCGC 2145 Query 179 TAGC---TAACCC-CATCAATTAACCTTCCGGCACCG-GGCAGGCGTCACACCC-TATAC 232 | || |||||| | ||| |||||||||| |||||| ||||| ||| || ||||| Sbjct 2146 TTGCGCATAACCCACCTCA-TTAACCTTCCAGCACCGCGGCAGCGCTCAGCCCAATATAC 2204 Query 233 GTCCACTTTCGTGTTTGCAG--AGTGCTGTGTTTTTAATAAACA---GTCGCAGCGGCCT 287 ||||||| |||||| |||| || | ||||||| |||| | ||||| || Sbjct 2205 TTCCACTTGCGTGTT-GCAGTAAGGCCCTTGTTTTTGGTAAAAACACGTCGCTCACCCCA 2263 Query 288 GGTATCTTCGACCGGCATGAGCTTACGG-AGCAAGTC-CTTCACCCTCACCGGCGCACCT 345 || || | ||| ||| | |||| ||||||| |||||| ||| || ||| Sbjct 2264 TTTA-CTGCAACCCTCATAATGCTACGTCAGCAAGTGACTTCACATTCAGCG-----CCT 2317 Query 346 TCTCCCGAAGTTAC 359 |||||||||||||| Sbjct 2318 TCTCCCGAAGTTAC 2331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260782084032