Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq730 165 2e-38 seq796 91.5 3e-16 >seq730 Length=6546 Score = 165 bits (182), Expect = 2e-38 Identities = 219/286 (77%), Gaps = 21/286 (7%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | ||||||| || |||| || | |||||||||| || | || Sbjct 3375 CGGCATCTTCACCGTTACTACAATT-CAACGAGCTCATGGCTGAGACAGTGTCCCAGACG 3317 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTT-CGCT-ACCTTAGGACC 122 | || ||||||| |||||||||| |||||||||||||||| |||| ||||||| ||| Sbjct 3316 TA---CCATTCGTGCAGGTCGGAACT-ACCCGACAAGGAATTTTCGCTTACCTTAG-ACC 3262 Query 123 GTTA-TAGTTACGGCCGCCGTTTACT-GGGGCTTAAGTTCACTGCTT----CGATTGCTC 176 |||| |||| |||||||||||||||| ||||||| | |||| ||||| || | Sbjct 3261 GTTACTAGTAACGGCCGCCGTTTACTGGGGGCTTCAATTCAATGCTTTCTCCGGAAG--A 3204 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236 ||||| | | ||||| ||||||||||||||||||| | || | |||| || ||||| Sbjct 3203 TAACATCTTCTCTTAA-CTTCCAGCACCGGGCAGGC-TGAGGCCTAATACTTC-ACTTGC 3147 Query 237 GACTTAG-CAGAAACCTG-TGTTTTTGGTAAACAGTCGCTTGGGCC 280 || || | || |||| |||||||| ||||| |||| ||| || Sbjct 3146 GATTTTGTGCGAGCCCTGCTGTTTTTGAAAAACATTCGCCTGGACC 3101 >seq796 Length=4978 Score = 91.5 bits (100), Expect = 3e-16 Identities = 162/221 (73%), Gaps = 23/221 (10%) Strand=Plus/Plus Query 63 CGTTACGCCT-TTCGTGCGGGTCGGAACTTACCCGAC-AAGGAATTTCGCTACCTTAGGA 120 ||||||||| ||||| | ||||| ||||||||||| || ||| |||||||| ||||| Sbjct 2031 CGTTACGCCGATTCGT-CAGGTCG--ACTTACCCGACTAACGAAATTCGCTAC--TAGGA 2085 Query 121 CCGTTATA-GTTACGGCCGCCGTTT-ACTGGGGCTT-----AAGTTCACTGCTT---CGA 170 | |||| |||||| | |||||| |||||| || || || | |||| || Sbjct 2086 ACCGTATATGTTACGCCGCCCGTTTTACTGGGACTGTCAAAAATTTAAAAGCTTGCGCGC 2145 Query 171 TTGCTC-TAACAGATCCCCTTAACCTTCCAGCACCG-GGCAGGCGTCAGCTC-CTATACA 227 |||| | |||| | | | ||||||||||||||||| ||||| ||||| | ||||| Sbjct 2146 TTGCGCATAACCCACCTCATTAACCTTCCAGCACCGCGGCAGCGCTCAGCCCAATATACT 2205 Query 228 TCGTCTTGCGACTTAGCAGAAA--CCTGTGTTTTTGGTAAA 266 || |||||| || |||| || || ||||||||||||| Sbjct 2206 TCCACTTGCGTGTT-GCAGTAAGGCCCTTGTTTTTGGTAAA 2245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062384903296