Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq796 132 9e-29 seq730 125 1e-26 >seq796 Length=4978 Score = 132 bits (146), Expect = 9e-29 Identities = 169/222 (76%), Gaps = 17/222 (8%) Strand=Plus/Minus Query 132 TTTGACTGGGG--CGGTCG-CCTCCC---AAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||||||||||| |||||| |||| | ||||||||||||||||||| || | | | || Sbjct 1693 TTTGACTGGGGGGCGGTCGGCCTCACTAGAAAGAGTAACGGAGGCGCCGAAGG-TCCTCT 1635 Query 186 CAGCTTGGATGGAAACCATGCGCAC--AGTGCAAAGGCAA-AAGGGTGTTTGACTGCGAC 242 ||| | |||||| | ||| | |||| ||| ||| ||||| | |||||||||| Sbjct 1634 GAGCA--GTTGGAAATCCGGCGAAAGGAGTGTAAACGCATTAAGGGAGCTTGACTGCGAG 1577 Query 243 ACCCTCAAGTCTAGCAGGGACGAAAGTCG-GGCTTAATGATCCGGCGG---TGCTGAAT- 297 || || ||| |||||| |||||||||| |||||| |||||||| | ||| || | Sbjct 1576 ACAAACACGTCGAGCAGGAACGAAAGTCGCGGCTTAGTGATCCGGTGAGTTTGCCGAGTT 1517 Query 298 GGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 1516 GGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATA 1475 >seq730 Length=6546 Score = 125 bits (138), Expect = 1e-26 Identities = 171/224 (76%), Gaps = 11/224 (5%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGG-CGGTCGCCTCCC-AAAGAG-TAACGGAGGCGCCCAAAGATAC 182 ||| ||||||||||||| ||||||||||| |||||| |||||||||| | |||| | | Sbjct 3561 GGGTAGTTTGACTGGGGTGGGTCGCCTCCCAAAAGAGATAACGGAGGCTTCTAAAGGT-C 3619 Query 183 CCTCAGCTTGGATGGAAACCATGC-GCACAG-TGCAAAGGCAAAAGGGTG-TTTGAC-TG 238 |||||| | || ||| ||| | | || ||||| |||| ||||| | |||||| || Sbjct 3620 CCTCAGTACGCTAGGTAACAGTGCGGTAGAGCTGCAATGGCATAAGGGAGCTTTGACGTG 3679 Query 239 CGACACCCT-CAAGTC-TAGCAGG-GACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGA 295 || || | || ||| | |||| |||||||| | ||||| |||||||| ||| | | Sbjct 3680 AGAGACAGTACAGGTCGGATCAGGTTACGAAAGTAGAGCTTAGTGATCCGGTGGTTCCGC 3739 Query 296 ATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| |||| |||||| | ||||||||| ||| | ||||||| Sbjct 3740 ATGGAAGGGCCATCGCTCAAAGGATAAAAGGTACTCCGGGGATA 3783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982386040096