Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq730 125 8e-27 >seq730 Length=6546 Score = 125 bits (138), Expect = 8e-27 Identities = 121/151 (80%), Gaps = 9/151 (6%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| ||||| | |||||||| |||||||||||||| |||||||| |||| ||| Sbjct 3401 GGGTCTTTCCGTCCACT-GCGGGTAAACGGCATCTTCACCGTTACTACAA-TTCAACGAG 3344 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 |||| || |||||||| ||||||||||||||||||||| ||||||| Sbjct 3343 CTCATGGCTGAGACAGTGTCCCAGACGT---ACCATTCGTGCAGGTCGGAAC-TACCCGA 3288 Query 145 CAAGGAA-TTTCGC-TACCTTAGGACCGTTA 173 ||||||| |||||| ||||||| |||||||| Sbjct 3287 CAAGGAATTTTCGCTTACCTTA-GACCGTTA 3258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547192467279