Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq730 293 5e-77 >seq730 Length=6546 Score = 293 bits (324), Expect = 5e-77 Identities = 274/336 (82%), Gaps = 13/336 (4%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| |||||| ||| |||||||||||| |||||||||| || ||| Sbjct 5304 CTTTACAA-CCGAAGGCCTTCT--CACTCACGCGGCATTG-CTGGATCAGG--TTGCCCC 5251 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 5250 ATTGTCCAAAATTCCC-ACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 5192 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| || |||||||||||||| ||| |||||||||||||||||| | |||||||| Sbjct 5191 TGTGGCTGGTCGTCCTCTCAGACCAGCTAC-GATCGTCGCCTTGGTGAG-CTTTACCTCA 5134 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| || | ||| || ||| | ||||| ||||||| |||| Sbjct 5133 CCAACTAGCTAATCAGATATCGGCCGCTCCAGGAGCAC-AGGCCTTGCGGTCCCCCGCTT 5075 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || |||| | |||||||||||||||||| ||| || |||||||||| || | Sbjct 5074 TCATCCGTTAGTCGTATGCGGTATTAGCGTAACTTT-CGCTCGTTATCCCCACCT--TGG 5018 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 ||| |||| | ||||||||||||| |||| ||| Sbjct 5017 GCACGTTCCGATATATTACTCACCCGTTCGCCACTC 4982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071984766880