Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq730 271 6e-71 >seq730 Length=6546 Score = 271 bits (300), Expect = 6e-71 Identities = 161/164 (98%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGA-TACACTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 6215 TCGAGTTGCAGACTACAATCCGGACTACGAATACACTTTCTGGGATTAGCTCCCCCTCGC 6156 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTG-TGAAGCCCTACCCATAAGGGC 118 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 6155 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTTGAAGCCCTACCCATAAGGGC 6096 Query 119 CATG-AGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 6095 CATGAAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 6052 Score = 73.4 bits (80), Expect = 3e-11 Identities = 110/151 (73%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACA-ATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||||| | ||||| ||| || |||| | | ||| ||||| || | Sbjct 582 TCGAGTTGCAGACTCCCGATCCGAACTGTGACCGGCTTTATAG-ATTCGCTCCTGGTCAC 524 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 |||| || ||||||| |||||| | ||||||| ||||| | | ||||| || Sbjct 523 CCAGTGGCTGCTCTCTGTACCGGCCATTG-AGCACGTGTGTAGCCCAAGGCGTAAGGCCC 465 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| || |||||||||| |||||||||||| Sbjct 464 GTGATGATTTGACGTCAT-CCCACCTTCCTC 435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415994273370