Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq730 167 4e-39 >seq730 Length=6546 Score = 167 bits (184), Expect = 4e-39 Identities = 222/297 (75%), Gaps = 11/297 (4%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | ||||||||| |||||| |||||||||| ||||| Sbjct 5643 CCCACGCTTTCGTGCATGAGCGTCAGTACAGGTCCAGGGGATTGCCTTCGCCATCGGTGT 5584 Query 61 TCCTCCGTATATCTACGCATTTCACC-GC-TACACACGG-AATTCCGATTGCCTCTC-CA 116 ||||||| |||||||||||||||||| || ||| | ||| |||||| || ||||| | Sbjct 5583 TCCTCCGCATATCTACGCATTTCACCTGCGTACCCGCGGCAATTCC-ATCCCCTCTGACC 5525 Query 117 GCACTCAAGAAAAA---CAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACA 173 | |||| || | |||| |||||||| | || | ||||| | |||||| Sbjct 5524 GTACTCTAGCTCGAGTGCAGTC-CAAATGCATTCCCAGGTTAGAGCCGGG-GATTTCAC- 5468 Query 174 TCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCC 233 | | ||| | |||||| | | | |||||| |||| ||| |||| |||||||||| Sbjct 5467 TATCGCTTACAAAACCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCTTGCA 5408 Query 234 ACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||||||||||||||| |||||||| | |||| Sbjct 5407 CCCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTACGGTA 5351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828788590791