Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq796 269 4e-70 seq730 215 8e-54 >seq796 Length=4978 Score = 269 bits (298), Expect = 4e-70 Identities = 229/274 (84%), Gaps = 11/274 (4%) Strand=Plus/Plus Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68 ||||| |||||||||| |||||| || | ||||| ||||||||| || || ||||| Sbjct 1155 GCTTCCCGCTTAGATGCTTTCAGCGGTT-TATCTTCCGAACTTAGCTACCG-GC-ATGCA 1211 Query 69 CTTGGCAGTACAACTG-GTGCACCAGAGGTTTGTCCATC---CCGGTC---CTCTCGTAC 121 || ||| ||||| | || |||||||| || || |||| |||||| ||||||||| Sbjct 1212 CT-GGCGTGACAACCGAGTACACCAGAGTTTCGTTCATCACTCCGGTCGTCCTCTCGTAC 1270 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 ||||||||| || |||||||||||| ||||||| |||||||||||||||||||| | Sbjct 1271 TAAGGACAGACCCCCTCAAATTTCCTGCGCCCACAGTAGATAGGGACCGAACTGTCTCAC 1330 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 ||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||||||| Sbjct 1331 GACGTTCTGAACCCAGCTCGCGTACCACTTTAATTGGCGAACAGCCAAACCCTTGGGACC 1390 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | |||||||||||||||| || |||||||||||| Sbjct 1391 TGCTTCAGCCCCAGGATGTGATGAGCCGACATCG 1424 >seq730 Length=6546 Score = 215 bits (238), Expect = 8e-54 Identities = 225/283 (80%), Gaps = 27/283 (10%) Strand=Plus/Minus Query 16 GCTT-AGATGCCTTCA-GCTCTTATCCCTTCCAAACTTA--GCTTCCCAGCTATGC-ACT 70 |||| |||||| |||| || ||||| |||||| ||||| ||| | | || |||| || Sbjct 4112 GCTTGAGATGCTTTCAAGCGGTTATCTCTTCCACACTTAAGGCTACTCGGCAATGCCACA 4053 Query 71 TGGCAGT-ACAACTGGTG-CACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA-CTAAGGA 127 ||| || ||||| | | ||| || | | |||||| |||||| ||||||| || ||| Sbjct 4052 TGGGCGTGACAACCGATTACACAAG-GCTGTGTCCACTCCGGTC-TCTCGTAACT--GGA 3997 Query 128 CAGC------TCCTCTCA-AATT--------TCCTACGCCCACGACGGATAGGGACCGAA 172 |||| ||| |||| |||| || | ||||||| || ||||||||||||| Sbjct 3996 CAGCAGAGCTTCCACTCACAATTCTGCATCTTCTTGCGCCCACAACAGATAGGGACCGAA 3937 Query 173 CTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACC 232 |||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct 3936 CTGTCTTGCGACGTTCTGAACCCAGCTCACGTGCCGCTTTAATGGGCGAACAGCCCAACC 3877 Query 233 CTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||| || ||||||||||||| ||||||||||||||| Sbjct 3876 CTTGGGACCTTCTCCAGCCCCAGGATGCGACGAGCCGACATCG 3834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780789251556