Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq730 304 3e-80 >seq730 Length=6546 Score = 304 bits (336), Expect = 3e-80 Identities = 326/413 (79%), Gaps = 25/413 (6%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||||||| ||||||||||| || |||||||||| |||| |||||| |||| ||||| Sbjct 5304 CTTTACAACC-GAAGGCCTTCT-CACTCACGCGGCATTGCTGGATCAGG-TTGC-CCCAT 5249 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5248 TGTCCAAAATTCCC-ACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 5190 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||||||||| ||||||||||||||||| ||||||||||| |||| | | ||||| | || Sbjct 5189 TGGCTGGTCGTCCTCTCAGACCAGCTA-CGATCGTCGCCTTGGTGAG-CTTTACCTCACC 5132 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 |||||||||||| || | || ||| || | ||||| |||||||| |||| Sbjct 5131 AACTAGCTAATCAGATATCGGCCGCTCCAGGAG-CACAGGCCTTGCGGTCCCCCGCTTTC 5073 Query 244 GT-CTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGG 302 | | | | || |||||||||||||| ||| | | ||||||||| | | || Sbjct 5072 ATCCGTTAGTCG-TATGCGGTATTAGCGTAACTTT-CGCTCGTTATCCCC--ACCTTGGG 5017 Query 303 CAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGC-TGCTTC 361 || |||| | | ||||||||||||| ||||||||| || | ||| | || | |||| Sbjct 5016 CACGTTCCGATATATTACTCACCCGTTCGCCACTCGCCACC--AGCCGAAACCGTGCT-- 4961 Query 362 CTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||||||||||||||||||| || |||||||||||||||| ||||| Sbjct 4960 ------CCGTTCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCAA-CTGAG 4915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222382629696