Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq730 302 1e-79 >seq730 Length=6546 Score = 302 bits (334), Expect = 1e-79 Identities = 283/354 (80%), Gaps = 27/354 (8%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 |||||||||||||||||| |||||| | || ||||||||||||||| ||||| | |||| Sbjct 5117 TCTGATTAGCTAGTTGGTGAGGTAAAG-CTCACCAAGGCGACGATC-GTAGCTGGTCTGA 5174 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 |||| || | |||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 5175 GAGGACGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGT 5234 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 |||||| ||| |||||||| || |||||| |||||| |||||||||| || |||||| Sbjct 5235 -GGGAATTTTGGACAATGGGGCAA--CCTGATCCAGCAATGCCGCGTGAGTGA-GAAGGC 5290 Query 344 CTTCGGGTCGTAAAGCTCTGT-CCTCAAGGAAGATA------------------ATGACG 384 |||| ||| |||||||||| | | |||||| | | |||| Sbjct 5291 CTTC-GGTTGTAAAGCTCTTTGTGTACGGGAAGAAACGCGGCTCTAAATCGTCTACGACG 5349 Query 385 GTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGG 444 |||| | || |||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 5350 GTACCGTAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 5409 Query 445 CTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 | ||||||| |||||||||| |||||||||| ||||| ||| ||||| |||| Sbjct 5410 CAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTTGTAAG 5462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497578719104