Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq730 286 8e-75 >seq730 Length=6546 Score = 286 bits (316), Expect = 8e-75 Identities = 270/332 (81%), Gaps = 17/332 (5%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||||||||||||||||||||||||||||||||| || ||||||| || Sbjct 5363 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 5422 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| ||||| ||| ||||| |||| | || ||||| | || Sbjct 5423 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTTGTAAGCGATAG-TGAAATCCCC-GG 5480 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCA---GGGCTAGAGTGCAG---GAGGGGCAAG 186 ||| | || |||| ||| |||| | ||||| | |||||||| | | |||||| Sbjct 5481 CTCTAACCTGGGAATGCATTTGGA-CTGCACTCGAGCTAGAGTACGGTCAGAGGGGA--- 5536 Query 187 TGGAATT-CCTAGTGTA-GC-GGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGA 243 ||||||| || | ||| || |||||||||||||||||| ||||||||||| |||||| Sbjct 5537 TGGAATTGCCGCGGGTACGCAGGTGAAATGCGTAGATATGCGGAGGAACACCGATGGCGA 5596 Query 244 AGGCGGCTTGCTGGA-CTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGA 302 |||| ||||| |||| |||||| || | || |||||||||||||||||||||||| Sbjct 5597 AGGCAATCCCCTGGACCTGT-ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGA 5655 Query 303 TTAGATACCCTGGTAGTCCACGCCGTAAACGA 334 |||||||||||||||||||||||| ||||||| Sbjct 5656 TTAGATACCCTGGTAGTCCACGCCCTAAACGA 5687 Score = 145 bits (160), Expect = 2e-32 Identities = 124/152 (82%), Gaps = 7/152 (5%) Strand=Plus/Plus Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8 ACTGACGCTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 67 Query 324 GCCGTAAACGATGAATACTAGGTGTCGG-----GGCGCATAAGTG--CTCCGGTGCCGCA 376 |||||||||||||| | |||| |||||| || | | | || | ||| | | Sbjct 68 GCCGTAAACGATGAGTGCTAGTTGTCGGATACTAGCTGTTGGGGGCACTTCAGTGGCTAA 127 Query 377 GCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || || || |||||| ||||||||||||||| Sbjct 128 GCGAAAGCGTTAAGTAATCCACCTGGGGAGTA 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203182902528